Gm54623 Gene Detail

Summary

• Symbol
  Gm54623
• Name
  predicted gene, 54623

• Feature Type
  rRNA gene
• IDs
  MGI:6845724
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:95072253-95072359 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845724	rRNA gene	Chr17:95072253-95072359 (+)
129S1/SvImJ	ENSMUSG00200022542	rRNA gene	Chr17:90490854-90490960 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	ENSMUSG00180000330	rRNA gene	Chr17:91583752-91583858 (+)
C3H/HeJ	ENSMUSG00175008069	rRNA gene	Chr17:90807451-90807557 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185010787	rRNA gene	Chr17:93441346-93441452 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230010949	rRNA gene	Chr17:94483909-94484015 (+)
NOD/ShiLtJ	ENSMUSG00190009489	rRNA gene	Chr17:90592522-90592628 (+)
NZO/HlLtJ	ENSMUSG00225029409	rRNA gene	Chr17:96776649-96776755 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010001762	rRNA gene	Chr8:126497175-126497188 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54623
  

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00002076104 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076104	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183003	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;