Gm54622 Gene Detail

Summary

• Symbol
  Gm54622
• Name
  predicted gene, 54622

• Feature Type
  miRNA gene
• IDs
  MGI:6845722
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:92170030-92170164 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845722	miRNA gene	Chr17:92170030-92170164 (+)
129S1/SvImJ	ENSMUSG00200022897	miRNA gene	Chr17:87591494-87591628 (+)
A/J	ENSMUSG00195030392	miRNA gene	Chr17:88991418-88991552 (+)
AKR/J	ENSMUSG00220016517	miRNA gene	Chr17:87976514-87976648 (+)
BALB/cJ	ENSMUSG00180027540	miRNA gene	Chr17:88663663-88663797 (+)
C3H/HeJ	ENSMUSG00175006973	miRNA gene	Chr17:87904287-87904421 (+)
C57BL/6NJ	ENSMUSG00215017606	miRNA gene	Chr17:87621200-87621334 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011766	miRNA gene	Chr17:88477904-88478038 (+)
CBA/J	ENSMUSG00210022287	miRNA gene	Chr17:87792742-87792876 (+)
DBA/2J	ENSMUSG00185020778	miRNA gene	Chr17:90543955-90544089 (+)
FVB/NJ	ENSMUSG00205006079	miRNA gene	Chr17:88390986-88391120 (+)
JF1/MsJ	ENSUMUG00000016381	miRNA gene	Chr17:90376826-90376948 (+)
LP/J	ENSMUSG00230010460	miRNA gene	Chr17:91586327-91586461 (+)
NOD/ShiLtJ	ENSMUSG00190010111	miRNA gene	Chr17:87670437-87670571 (+)
NZO/HlLtJ	ENSMUSG00225029378	miRNA gene	Chr17:93868177-93868311 (+)
PWK/PhJ	ENSLUMG00010031939	miRNA gene	Chr17:87561711-87561845 (+)
SPRET/EiJ	ENSMSPG00010021806	miRNA gene	Chr17:88146414-88146536 (+)
WSB/EiJ	ENSIUOG00005023034	miRNA gene	Chr17:88591805-88591939 (+)

Homology

• Gene Tree
  Gm54622
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076816 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076816	Ensembl Gene Model | MGI Sequence Detail	135	C57BL/6J
transcript	ENSMUST00020182273	Ensembl | MGI Sequence Detail	135	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;