Gm54618 Gene Detail

Summary

• Symbol
  Gm54618
• Name
  predicted gene, 54618

• Feature Type
  rRNA gene
• IDs
  MGI:6845714
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:26233845-26233944 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845714	rRNA gene	Chr10:26233845-26233944 (+)
129S1/SvImJ	ENSMUSG00200010276	rRNA gene	Chr10:23048924-23049023 (+)
A/J	ENSMUSG00195015421	rRNA gene	Chr10:23351237-23351336 (+)
AKR/J	ENSMUSG00220011341	rRNA gene	Chr10:23031668-23031767 (+)
BALB/cJ	ENSMUSG00180017656	rRNA gene	Chr10:23480045-23480144 (+)
C3H/HeJ	ENSMUSG00175025349	rRNA gene	Chr10:23148271-23148370 (+)
C57BL/6NJ	ENSMUSG00215012591	rRNA gene	Chr10:23025445-23025544 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013991	rRNA gene	Chr10:22807917-22808016 (+)
CBA/J	ENSMUSG00210023552	rRNA gene	Chr10:23140228-23140327 (+)
DBA/2J	ENSMUSG00185008300	rRNA gene	Chr10:23312237-23312336 (+)
FVB/NJ	ENSMUSG00205009998	rRNA gene	Chr10:23286747-23286846 (+)
JF1/MsJ	ENSUMUG00000019656	rRNA gene	Chr10:23077351-23077450 (+)
LP/J	ENSMUSG00230012273	rRNA gene	Chr10:25083413-25083512 (+)
NOD/ShiLtJ	ENSMUSG00190015638	rRNA gene	Chr10:23438017-23438116 (+)
NZO/HlLtJ	ENSMUSG00225031420	rRNA gene	Chr10:29342277-29342376 (+)
PWK/PhJ	ENSLUMG00010010426	rRNA gene	Chr10:22972124-22972223 (+)
SPRET/EiJ	ENSMSPG00010015066	rRNA gene	Chr10:23742091-23742190 (+)
WSB/EiJ	ENSIUOG00005031059	rRNA gene	Chr10:22725400-22725499 (+)

Homology

• Gene Tree
  Gm54618
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075974 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075974	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020183659	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;