Gm54617 Gene Detail

Summary

• Symbol
  Gm54617
• Name
  predicted gene, 54617

• Feature Type
  miRNA gene
• IDs
  MGI:6845712
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:91413638-91413698 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845712	miRNA gene	Chr17:91413638-91413698 (+)
129S1/SvImJ	ENSMUSG00200022421	miRNA gene	Chr17:86827943-86828003 (+)
A/J	ENSMUSG00195029384	miRNA gene	Chr17:88230088-88230148 (+)
AKR/J	ENSMUSG00220016269	miRNA gene	Chr17:87246803-87246863 (+)
BALB/cJ	ENSMUSG00180027211	miRNA gene	Chr17:87902097-87902157 (+)
C3H/HeJ	ENSMUSG00175007124	miRNA gene	Chr17:87176442-87176502 (+)
C57BL/6NJ	ENSMUSG00215020967	miRNA gene	Chr17:86863818-86863878 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011786	miRNA gene	Chr17:87715606-87715666 (+)
CBA/J	ENSMUSG00210022231	miRNA gene	Chr17:87031175-87031235 (+)
DBA/2J	ENSMUSG00185020637	miRNA gene	Chr17:89816101-89816161 (+)
FVB/NJ	ENSMUSG00205006089	miRNA gene	Chr17:87646668-87646728 (+)
JF1/MsJ	ENSUMUG00000015536	miRNA gene	Chr17:89596279-89596339 (+)
LP/J	ENSMUSG00230010561	miRNA gene	Chr17:90858360-90858420 (+)
NOD/ShiLtJ	ENSMUSG00190009540	miRNA gene	Chr17:86908928-86908988 (+)
NZO/HlLtJ	ENSMUSG00225029447	miRNA gene	Chr17:93099205-93099265 (+)
PWK/PhJ	ENSLUMG00010033186	miRNA gene	Chr17:86789837-86789897 (+)
SPRET/EiJ	ENSMSPG00010021348	miRNA gene	Chr17:87410986-87411046 (+)
WSB/EiJ	ENSIUOG00005023344	miRNA gene	Chr17:87850308-87850368 (+)

Homology

• Gene Tree
  Gm54617
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076576 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076576	Ensembl Gene Model | MGI Sequence Detail	61	C57BL/6J
transcript	ENSMUST00020182084	Ensembl | MGI Sequence Detail	61	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;