Gm54615 Gene Detail

Summary

• Symbol
  Gm54615
• Name
  predicted gene, 54615

• Feature Type
  rRNA gene
• IDs
  MGI:6845708
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:97337809-97337888 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845708	rRNA gene	Chr12:97337809-97337888 (-)
129S1/SvImJ	ENSMUSG00200017926	rRNA gene	Chr12:89132270-89132349 (-)
A/J	ENSMUSG00195022272	rRNA gene	Chr12:91677426-91677505 (-)
AKR/J	ENSMUSG00220018204	rRNA gene	Chr12:89567849-89567928 (-)
BALB/cJ	ENSMUSG00180015826	rRNA gene	Chr12:90820706-90820785 (-)
C3H/HeJ	ENSMUSG00175036260	rRNA gene	Chr12:93459906-93459985 (-)
C57BL/6NJ	ENSMUSG00215017737	rRNA gene	Chr12:90120812-90120891 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006060	rRNA gene	Chr12:89780184-89780263 (-)
CBA/J	ENSMUSG00210019118	rRNA gene	Chr12:90494540-90494619 (-)
DBA/2J	ENSMUSG00185046215	rRNA gene	Chr12:92269528-92269607 (-)
FVB/NJ	ENSMUSG00205000682	rRNA gene	Chr12:89657339-89657418 (-)
JF1/MsJ	ENSUMUG00000025370	rRNA gene	Chr12:96966734-96966813 (-)
LP/J	ENSMUSG00230004904	rRNA gene	Chr12:99397436-99397515 (-)
NOD/ShiLtJ	ENSMUSG00190005448	rRNA gene	Chr12:95659554-95659633 (+)
NZO/HlLtJ	ENSMUSG00225033931	rRNA gene	Chr12:101108064-101108143 (-)
PWK/PhJ	ENSLUMG00010003595	rRNA gene	Chr12:90453244-90453323 (-)
SPRET/EiJ	ENSMSPG00010020113	rRNA gene	Chr12:92916245-92916324 (-)
WSB/EiJ	ENSIUOG00005002170	rRNA gene	Chr12:89489980-89490059 (-)

Homology

• Gene Tree
  Gm54615
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076662 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076662	Ensembl Gene Model | MGI Sequence Detail	80	C57BL/6J
transcript	ENSMUST00020183173	Ensembl | MGI Sequence Detail	80	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;