Gm54613 Gene Detail

Summary

• Symbol
  Gm54613
• Name
  predicted gene, 54613

• Feature Type
  miRNA gene
• IDs
  MGI:6845704
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:69608003-69608111 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  60

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845704	miRNA gene	Chr12:69608003-69608111 (-)
129S1/SvImJ	ENSMUSG00200033009	miRNA gene	ChrX:61259153-61259261 (-)
129S1/SvImJ	ENSMUSG00200008423	miRNA gene	Chr8:51433208-51433314 (-)
129S1/SvImJ	ENSMUSG00200033891	miRNA gene	Chr12:61520363-61520471 (-)
A/J	ENSMUSG00195031335	miRNA gene	Chr13:95365527-95365635 (-)
A/J	ENSMUSG00195042606	miRNA gene	ChrX:65000232-65000340 (-)
A/J	ENSMUSG00195014319	miRNA gene	Chr12:64207223-64207331 (-)
A/J	ENSMUSG00195012921	miRNA gene	Chr8:51824798-51824904 (-)
AKR/J	ENSMUSG00220015141	miRNA gene	Chr12:62000438-62000546 (-)
AKR/J	ENSMUSG00220000910	miRNA gene	Chr1:24603237-24603345 (-)
AKR/J	ENSMUSG00220006700	miRNA gene	Chr8:51676986-51677092 (-)
AKR/J	ENSMUSG00220048326	miRNA gene	ChrX:60115783-60115891 (-)
AKR/J	ENSMUSG00220004895	miRNA gene	Chr6:45123215-45123321 (+)
AKR/J	ENSMUSG00220012921	miRNA gene	Chr4:108454185-108454290 (+)
BALB/cJ	ENSMUSG00180025978	miRNA gene	ChrX:61573981-61574089 (-)
BALB/cJ	ENSMUSG00180014723	miRNA gene	Chr8:51508853-51508959 (-)
BALB/cJ	ENSMUSG00180040387	miRNA gene	Chr13:95899815-95899923 (-)
BALB/cJ	ENSMUSG00180035182	miRNA gene	Chr12:63206296-63206404 (-)
C3H/HeJ	ENSMUSG00175032278	miRNA gene	ChrX:65153782-65153890 (-)
C3H/HeJ	ENSMUSG00175008310	miRNA gene	Chr8:51684187-51684293 (-)
C3H/HeJ	ENSMUSG00175030504	miRNA gene	Chr12:66300712-66300820 (-)
C3H/HeJ	ENSMUSG00175000816	miRNA gene	Chr1:24530527-24530635 (-)
C57BL/6NJ	ENSMUSG00215033406	miRNA gene	Chr12:62591704-62591812 (-)
C57BL/6NJ	ENSMUSG00215011653	miRNA gene	Chr8:51431148-51431254 (-)
C57BL/6NJ	ENSMUSG00215019160	miRNA gene	ChrX:61694785-61694893 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023236	miRNA gene	Chr4:107996575-107996680 (+)
CAST/EiJ	ENSTCUG00005035712	miRNA gene	Chr12:62550326-62550434 (-)
CAST/EiJ	ENSTCUG00005006843	miRNA gene	Chr8:51460712-51460818 (-)
CBA/J	ENSMUSG00210025864	miRNA gene	ChrX:61847099-61847207 (-)
CBA/J	ENSMUSG00210031577	miRNA gene	Chr12:62770734-62770842 (-)
CBA/J	ENSMUSG00210009718	miRNA gene	Chr8:51517001-51517107 (-)
DBA/2J	ENSMUSG00185008991	miRNA gene	Chr8:57668362-57668468 (-)
DBA/2J	ENSMUSG00185039149	miRNA gene	ChrX:74253960-74254068 (-)
DBA/2J	ENSMUSG00185004930	miRNA gene	Chr12:64670144-64670252 (-)
DBA/2J	ENSMUSG00185020779	miRNA gene	Chr13:99065119-99065227 (-)
FVB/NJ	ENSMUSG00205013895	miRNA gene	Chr8:50920579-50920685 (-)
FVB/NJ	ENSMUSG00205038434	miRNA gene	Chr12:62393449-62393557 (-)
FVB/NJ	ENSMUSG00205045816	miRNA gene	Chr4:107396496-107396601 (+)
FVB/NJ	ENSMUSG00205020086	miRNA gene	ChrX:61178734-61178842 (-)
FVB/NJ	ENSMUSG00205007346	miRNA gene	Chr1:24519241-24519349 (-)
JF1/MsJ	ENSUMUG00000051020	miRNA gene	Chr4:109301994-109302099 (+)
JF1/MsJ	ENSUMUG00000016643	miRNA gene	Chr6:45474479-45474585 (+)
JF1/MsJ	ENSUMUG00000030216	miRNA gene	Chr12:68635356-68635464 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012260	miRNA gene	Chr12:61821665-61821773 (-)
NOD/ShiLtJ	ENSMUSG00190010566	miRNA gene	Chr8:51450420-51450526 (-)
NOD/ShiLtJ	ENSMUSG00190026062	miRNA gene	ChrX:61139411-61139519 (-)
NOD/ShiLtJ	ENSMUSG00190000170	miRNA gene	Chr1:24533749-24533857 (-)
NZO/HlLtJ	ENSMUSG00225031742	miRNA gene	Chr8:64728390-64728496 (-)
NZO/HlLtJ	ENSMUSG00225038238	miRNA gene	Chr12:73722415-73722523 (-)
NZO/HlLtJ	ENSMUSG00225037768	miRNA gene	Chr13:101579703-101579811 (-)
NZO/HlLtJ	ENSMUSG00225030377	miRNA gene	Chr12:18965745-18965851 (-)
PWK/PhJ	ENSLUMG00010013958	miRNA gene	Chr8:51351650-51351756 (-)
PWK/PhJ	ENSLUMG00010031382	miRNA gene	Chr12:62720385-62720493 (-)
PWK/PhJ	ENSLUMG00010049416	miRNA gene	Chr4:106694800-106694905 (+)
SPRET/EiJ	ENSMSPG00010047569	miRNA gene	Chr7:30623557-30623665 (-)
SPRET/EiJ	ENSMSPG00010014211	miRNA gene	Chr1:44127126-44127234 (+)
SPRET/EiJ	ENSMSPG00010030942	miRNA gene	Chr12:64404567-64404675 (-)
SPRET/EiJ	ENSMSPG00010000944	miRNA gene	Chr1:25310595-25310703 (-)
WSB/EiJ	ENSIUOG00005012691	miRNA gene	Chr12:62460946-62461054 (-)
WSB/EiJ	ENSIUOG00005017969	miRNA gene	Chr8:52349601-52349707 (-)

Homology

• Gene Tree
  Gm54613
  

Sequences &
Gene Models

• All Sequences
  62

• Ensembl
  ENSMUSG00002075915 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075915	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020181770	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;