Gm54609 Gene Detail

Summary

• Symbol
  Gm54609
• Name
  predicted gene, 54609

• Feature Type
  miRNA gene
• IDs
  MGI:6845696
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:48691301-48691397 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  55 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845696	miRNA gene	Chr13:48691301-48691397 (+)
129S1/SvImJ	ENSMUSG00200036235	miRNA gene	Chr13:45969715-45969811 (+)
A/J	ENSMUSG00195031648	miRNA gene	Chr13:45019280-45019376 (+)
AKR/J	ENSMUSG00220009945	miRNA gene	Chr13:44830116-44830212 (+)
BALB/cJ	ENSMUSG00180008783	miRNA gene	Chr13:45321583-45321679 (+)
C3H/HeJ	ENSMUSG00175030420	miRNA gene	Chr13:45292046-45292142 (+)
C57BL/6NJ	ENSMUSG00215007492	miRNA gene	Chr13:45438603-45438699 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033458	miRNA gene	Chr13:45348828-45348924 (+)
CBA/J	ENSMUSG00210028210	miRNA gene	Chr13:45297416-45297512 (+)
DBA/2J	ENSMUSG00185033548	miRNA gene	Chr13:46111446-46111542 (+)
FVB/NJ	ENSMUSG00205011881	miRNA gene	Chr13:45074357-45074453 (+)
JF1/MsJ	ENSUMUG00000020254	miRNA gene	Chr13:45638879-45638975 (+)
LP/J	ENSMUSG00230029921	miRNA gene	Chr13:55432277-55432373 (+)
NOD/ShiLtJ	ENSMUSG00190012827	miRNA gene	Chr13:45516315-45516411 (+)
NZO/HlLtJ	ENSMUSG00225036141	miRNA gene	Chr13:49182673-49182769 (+)
PWK/PhJ	ENSLUMG00010022579	miRNA gene	Chr13:44495391-44495487 (+)
SPRET/EiJ	ENSMSPG00010031505	miRNA gene	Chr13:44622150-44622246 (+)
WSB/EiJ	ENSIUOG00005029014	miRNA gene	Chr13:44653368-44653464 (+)

Homology

• Gene Tree
  Gm54609
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075428 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075428	Ensembl Gene Model | MGI Sequence Detail	97	C57BL/6J
transcript	ENSMUST00020183118	Ensembl | MGI Sequence Detail	97	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;