Gm54605 Gene Detail

Summary

• Symbol
  Gm54605
• Name
  predicted gene, 54605

• Feature Type
  snRNA gene
• IDs
  MGI:6845688
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:47395920-47396020 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845688	snRNA gene	ChrX:47395920-47396020 (+)
129S1/SvImJ	ENSMUSG00200037863	snRNA gene	ChrX:31427412-31427512 (+)
A/J	ENSMUSG00195017613	snRNA gene	ChrX:34029032-34029132 (+)
AKR/J	ENSMUSG00220041408	snRNA gene	ChrX:30917469-30917569 (+)
BALB/cJ	ENSMUSG00180034301	snRNA gene	ChrX:31758943-31759043 (+)
C3H/HeJ	ENSMUSG00175045203	snRNA gene	ChrX:34777309-34777409 (+)
C57BL/6NJ	ENSMUSG00215049023	snRNA gene	ChrX:31770780-31770880 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039311	snRNA gene	ChrX:33853017-33853117 (+)
CBA/J	ENSMUSG00210043099	snRNA gene	ChrX:32020842-32020942 (+)
DBA/2J	ENSMUSG00185035042	snRNA gene	ChrX:42727221-42727321 (+)
FVB/NJ	ENSMUSG00205032201	snRNA gene	ChrX:30706774-30706874 (+)
JF1/MsJ	ENSUMUG00000031722	snRNA gene	ChrX:61782119-61782219 (+)
LP/J	ENSMUSG00230020152	snRNA gene	ChrX:49259855-49259955 (+)
NOD/ShiLtJ	ENSMUSG00190035806	snRNA gene	ChrX:31196748-31196848 (+)
NZO/HlLtJ	ENSMUSG00225043941	snRNA gene	ChrX:54453268-54453368 (+)
PWK/PhJ	ENSLUMG00010042942	snRNA gene	ChrX:31500094-31500194 (+)
SPRET/EiJ	ENSMSPG00010024741	snRNA gene	ChrX:33083581-33083681 (+)
WSB/EiJ	ENSIUOG00005047200	snRNA gene	ChrX:32307110-32307210 (+)

Homology

• Gene Tree
  Gm54605
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076264 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076264	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020181769	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;