Gm54602 Gene Detail

Summary

• Symbol
  Gm54602
• Name
  predicted gene, 54602

• Feature Type
  miRNA gene
• IDs
  MGI:6845682
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:60568967-60569055 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845682	miRNA gene	Chr19:60568967-60569055 (+)
129S1/SvImJ	ENSMUSG00200015285	miRNA gene	Chr19:57277019-57277107 (+)
A/J	ENSMUSG00195002653	miRNA gene	Chr19:57455653-57455741 (+)
AKR/J	ENSMUSG00220018073	miRNA gene	Chr19:57201703-57201791 (+)
BALB/cJ	ENSMUSG00180018976	miRNA gene	Chr19:57689900-57689988 (+)
C3H/HeJ	ENSMUSG00175023053	miRNA gene	Chr19:57230836-57230924 (+)
C57BL/6NJ	ENSMUSG00215029356	miRNA gene	Chr19:57318017-57318105 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015428	miRNA gene	Chr19:56867568-56867656 (+)
CBA/J	ENSMUSG00210021537	miRNA gene	Chr19:57310811-57310899 (+)
DBA/2J	ENSMUSG00185028482	miRNA gene	Chr19:57806757-57806845 (+)
FVB/NJ	ENSMUSG00205003903	miRNA gene	Chr19:56704933-56705021 (+)
JF1/MsJ	ENSUMUG00000039362	miRNA gene	Chr19:58010827-58010915 (+)
LP/J	ENSMUSG00230028153	miRNA gene	Chr19:58559314-58559402 (+)
NOD/ShiLtJ	ENSMUSG00190013239	miRNA gene	Chr19:57243108-57243196 (+)
NZO/HlLtJ	ENSMUSG00225021020	miRNA gene	Chr19:62184122-62184210 (+)
PWK/PhJ	ENSLUMG00010018769	miRNA gene	Chr19:57048988-57049076 (+)
SPRET/EiJ	ENSMSPG00010003507	miRNA gene	Chr19:56886925-56887013 (+)
WSB/EiJ	ENSIUOG00005025223	miRNA gene	Chr19:56656130-56656218 (+)

Homology

• Gene Tree
  Gm54602
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075851 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075851	Ensembl Gene Model | MGI Sequence Detail	89	C57BL/6J
transcript	ENSMUST00020182333	Ensembl | MGI Sequence Detail	89	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;