Gm54601 Gene Detail

Summary

• Symbol
  Gm54601
• Name
  predicted gene, 54601

• Feature Type
  miRNA gene
• IDs
  MGI:6845680
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:67312279-67312396 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845680	miRNA gene	Chr14:67312279-67312396 (+)
129S1/SvImJ	ENSMUSG00200031633	miRNA gene	Chr14:55927960-55928077 (+)
A/J	ENSMUSG00195015808	miRNA gene	Chr14:56093458-56093575 (+)
AKR/J	ENSMUSG00220032094	miRNA gene	Chr14:55434153-55434270 (+)
BALB/cJ	ENSMUSG00180036438	miRNA gene	Chr14:55709639-55709756 (+)
C3H/HeJ	ENSMUSG00175040748	miRNA gene	Chr14:57464435-57464552 (+)
C57BL/6NJ	ENSMUSG00215026653	miRNA gene	Chr14:55647148-55647265 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039571	miRNA gene	Chr14:57350713-57350830 (+)
CBA/J	ENSMUSG00210041225	miRNA gene	Chr14:56082209-56082326 (+)
DBA/2J	ENSMUSG00185024144	miRNA gene	Chr14:61262264-61262381 (+)
FVB/NJ	ENSMUSG00205040668	miRNA gene	Chr14:55596274-55596391 (+)
JF1/MsJ	ENSUMUG00000044297	miRNA gene	Chr14:72421386-72421503 (+)
LP/J	ENSMUSG00230036818	miRNA gene	Chr14:73291466-73291583 (+)
NOD/ShiLtJ	ENSMUSG00190044339	miRNA gene	Chr14:55875426-55875543 (+)
NZO/HlLtJ	ENSMUSG00225040404	miRNA gene	Chr14:63608306-63608423 (+)
PWK/PhJ	ENSLUMG00010038289	miRNA gene	Chr14:55298064-55298181 (+)
SPRET/EiJ	ENSMSPG00010035871	miRNA gene	Chr14:58812675-58812792 (+)
WSB/EiJ	ENSIUOG00005041858	miRNA gene	Chr14:55319492-55319609 (+)

Homology

• Gene Tree
  Gm54601
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075433 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075433	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020183151	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;