Gm54594 Gene Detail

Summary

• Symbol
  Gm54594
• Name
  predicted gene, 54594

• Feature Type
  snoRNA gene
• IDs
  MGI:6845666
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:47134196-47134324 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845666	snoRNA gene	Chr13:47134196-47134324 (+)
129S1/SvImJ	ENSMUSG00200036015	snoRNA gene	Chr13:44393266-44393394 (+)
A/J	ENSMUSG00195031532	snoRNA gene	Chr13:43448312-43448440 (+)
AKR/J	ENSMUSG00220009924	snoRNA gene	Chr13:43253804-43253932 (+)
BALB/cJ	ENSMUSG00180008910	snoRNA gene	Chr13:43750728-43750856 (+)
C3H/HeJ	ENSMUSG00175029333	snoRNA gene	Chr13:43714869-43714997 (+)
C57BL/6NJ	ENSMUSG00215006307	snoRNA gene	Chr13:43878765-43878893 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032288	snoRNA gene	Chr13:43781421-43781549 (+)
CBA/J	ENSMUSG00210028380	snoRNA gene	Chr13:43720379-43720507 (+)
DBA/2J	ENSMUSG00185033988	snoRNA gene	Chr13:44540469-44540597 (+)
FVB/NJ	ENSMUSG00205012034	snoRNA gene	Chr13:43500534-43500662 (+)
JF1/MsJ	ENSUMUG00000018753	snoRNA gene	Chr13:44053466-44053594 (+)
LP/J	ENSMUSG00230030554	snoRNA gene	Chr13:53856352-53856480 (+)
NOD/ShiLtJ	ENSMUSG00190012140	snoRNA gene	Chr13:43939098-43939226 (+)
NZO/HlLtJ	ENSMUSG00225036337	snoRNA gene	Chr13:47629684-47629812 (+)
PWK/PhJ	ENSLUMG00010021243	snoRNA gene	Chr13:42904303-42904431 (+)
SPRET/EiJ	ENSMSPG00010033267	snoRNA gene	Chr13:43011522-43011650 (+)
WSB/EiJ	ENSIUOG00005027599	snoRNA gene	Chr13:43092346-43092474 (+)

Homology

• Gene Tree
  Gm54594
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075605 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075605	Ensembl Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	ENSMUST00020181767	Ensembl | MGI Sequence Detail	129	Not Applicable

Other
Accession IDs

MGI:5454546

References

• Summaries
  All 2
• Earliest
  J:85000 Mouse Genome Informatics Scientific Curators, MGI Sequence Curation Reference. 2003;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;