Gm54591 Gene Detail

Summary

• Symbol
  Gm54591
• Name
  predicted gene, 54591

• Feature Type
  miRNA gene
• IDs
  MGI:6845660
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:22274156-22274262 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  41

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845660	miRNA gene	Chr15:22274156-22274262 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195011006	miRNA gene	Chr15:719442-719548 (-)
A/J	ENSMUSG00195027230	miRNA gene	Chr5:86110462-86110568 (+)
A/J	ENSMUSG00195037759	miRNA gene	Chr5:96120355-96120461 (+)
A/J	ENSMUSG00195021128	miRNA gene	ChrX:109688754-109688857 (+)
AKR/J	ENSMUSG00220001704	miRNA gene	Chr15:19077344-19077450 (+)
BALB/cJ	ENSMUSG00180038208	miRNA gene	Chr5:96271082-96271188 (+)
C3H/HeJ	ENSMUSG00175033500	miRNA gene	Chr15:843536-843642 (-)
C57BL/6NJ	ENSMUSG00215008308	miRNA gene	Chr15:19217076-19217182 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015366	miRNA gene	Chr13:16667928-16668034 (+)
CAST/EiJ	ENSTCUG00005041816	miRNA gene	Chr2:130022122-130022223 (+)
CAST/EiJ	ENSTCUG00005002678	miRNA gene	Chr15:19308505-19308611 (+)
CBA/J	ENSMUSG00210026046	miRNA gene	Chr15:831500-831606 (-)
DBA/2J	ENSMUSG00185009475	miRNA gene	Chr14:78473734-78473837 (-)
DBA/2J	ENSMUSG00185034039	miRNA gene	Chr15:810954-811060 (-)
FVB/NJ	ENSMUSG00205032531	miRNA gene	Chr15:758932-759038 (-)
JF1/MsJ	ENSUMUG00000011319	miRNA gene	ChrX:139984649-139984752 (+)
JF1/MsJ	ENSUMUG00000033673	miRNA gene	Chr2:130574765-130574871 (+)
JF1/MsJ	ENSUMUG00000042359	miRNA gene	Chr12:103278106-103278207 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001843	miRNA gene	Chr15:19237851-19237957 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010014206	miRNA gene	Chr12:96711926-96712032 (-)
PWK/PhJ	ENSLUMG00010009419	miRNA gene	ChrX:104598767-104598870 (+)
PWK/PhJ	ENSLUMG00010004744	miRNA gene	Chr2:50379445-50379551 (+)
SPRET/EiJ	ENSMSPG00010045573	miRNA gene	Chr11:81103890-81103995 (-)
SPRET/EiJ	ENSMSPG00010049687	miRNA gene	Chr1:167663717-167663822 (-)
SPRET/EiJ	ENSMSPG00010023098	miRNA gene	ChrX:102140281-102140386 (-)
SPRET/EiJ	ENSMSPG00010015534	miRNA gene	Chr8:56698852-56698958 (-)
SPRET/EiJ	ENSMSPG00010014258	miRNA gene	Chr7:72055921-72056226 (+)
SPRET/EiJ	ENSMSPG00010006588	miRNA gene	Chr7:29654208-29654314 (+)
SPRET/EiJ	ENSMSPG00010000437	miRNA gene	Chr6:79059503-79059609 (+)
SPRET/EiJ	ENSMSPG00010024026	miRNA gene	Chr6:20623716-20623822 (-)
SPRET/EiJ	ENSMSPG00010016008	miRNA gene	Chr4:85559873-85559979 (+)
SPRET/EiJ	ENSMSPG00010000177	miRNA gene	Chr3:6577630-6577733 (+)
SPRET/EiJ	ENSMSPG00010015981	miRNA gene	Chr2:12436497-12436603 (+)
SPRET/EiJ	ENSMSPG00010049668	miRNA gene	Chr11:64301166-64301272 (-)
SPRET/EiJ	ENSMSPG00010011288	miRNA gene	Chr2:49172604-49172709 (+)
SPRET/EiJ	ENSMSPG00010002068	miRNA gene	Chr12:34652542-34652648 (+)
SPRET/EiJ	ENSMSPG00010024208	miRNA gene	Chr15:21042317-21042424 (-)
WSB/EiJ	ENSIUOG00005004647	miRNA gene	Chr14:72423053-72423156 (-)
WSB/EiJ	ENSIUOG00005030911	miRNA gene	Chr5:88737517-88737624 (+)
WSB/EiJ	ENSIUOG00005030706	miRNA gene	Chr15:731574-731680 (-)

Homology

• Gene Tree
  Gm54591
  

Sequences &
Gene Models

• All Sequences
  43

• Ensembl
  ENSMUSG00002075753 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075753	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182704	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;