Gm54590 Gene Detail

Summary

• Symbol
  Gm54590
• Name
  predicted gene, 54590

• Feature Type
  miRNA gene
• IDs
  MGI:6845658
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:21947417-21947585 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845658	miRNA gene	Chr15:21947417-21947585 (-)
129S1/SvImJ	ENSMUSG00200004446	miRNA gene	Chr15:18957186-18957354 (-)
A/J	ENSMUSG00195011637	miRNA gene	Chr15:18880185-18880353 (-)
AKR/J	ENSMUSG00220001694	miRNA gene	Chr15:18750087-18750255 (-)
BALB/cJ	ENSMUSG00180009710	miRNA gene	Chr15:18849036-18849204 (-)
C3H/HeJ	ENSMUSG00175002029	miRNA gene	Chr15:18959259-18959427 (-)
C57BL/6NJ	ENSMUSG00215007986	miRNA gene	Chr15:18889812-18889980 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002593	miRNA gene	Chr15:18981384-18981552 (-)
CBA/J	ENSMUSG00210004917	miRNA gene	Chr15:18947856-18948024 (-)
DBA/2J	ENSMUSG00185003456	miRNA gene	Chr15:18941730-18941898 (-)
FVB/NJ	ENSMUSG00205010667	miRNA gene	Chr15:18861549-18861717 (-)
JF1/MsJ	ENSUMUG00000013634	miRNA gene	Chr15:18950414-18950582 (-)
LP/J	ENSMUSG00230015646	miRNA gene	Chr15:22432783-22432951 (-)
NOD/ShiLtJ	ENSMUSG00190001894	miRNA gene	Chr15:18910615-18910783 (-)
NZO/HlLtJ	ENSMUSG00225032032	miRNA gene	Chr15:22672417-22672585 (-)
PWK/PhJ	ENSLUMG00010015079	miRNA gene	Chr15:19128400-19128568 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005012124	miRNA gene	Chr15:18904961-18905129 (-)

Homology

• Gene Tree
  Gm54590
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076535 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076535	Ensembl Gene Model | MGI Sequence Detail	169	C57BL/6J
transcript	ENSMUST00020182012	Ensembl | MGI Sequence Detail	169	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;