Gm54589 Gene Detail

Summary

• Symbol
  Gm54589
• Name
  predicted gene, 54589

• Feature Type
  miRNA gene
• IDs
  MGI:6845656
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:20920300-20920406 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845656	miRNA gene	Chr15:20920300-20920406 (+)
129S1/SvImJ	ENSMUSG00200004441	miRNA gene	Chr15:17939674-17939780 (+)
A/J	ENSMUSG00195011659	miRNA gene	Chr15:17883698-17883744 (+)
AKR/J	ENSMUSG00220001693	miRNA gene	Chr15:17724765-17724871 (+)
BALB/cJ	ENSMUSG00180009708	miRNA gene	Chr15:17836198-17836304 (+)
C3H/HeJ	ENSMUSG00175002027	miRNA gene	Chr15:17931388-17931494 (+)
C57BL/6NJ	ENSMUSG00215007979	miRNA gene	Chr15:17862186-17862292 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002599	miRNA gene	Chr15:17968633-17968679 (+)
CBA/J	ENSMUSG00210004945	miRNA gene	Chr15:17929230-17929245 (+)
DBA/2J	ENSMUSG00185003453	miRNA gene	Chr15:17928991-17929097 (+)
FVB/NJ	ENSMUSG00205010690	miRNA gene	Chr15:17831061-17831107 (+)
JF1/MsJ	ENSUMUG00000013645	miRNA gene	Chr15:17954220-17954280 (+)
LP/J	ENSMUSG00230016148	miRNA gene	Chr15:21414336-21414442 (+)
NOD/ShiLtJ	ENSMUSG00190001891	miRNA gene	Chr15:17880105-17880211 (+)
NZO/HlLtJ	ENSMUSG00225032057	miRNA gene	Chr15:21646097-21646203 (+)
PWK/PhJ	ENSLUMG00010015086	miRNA gene	Chr15:18101896-18101956 (+)
SPRET/EiJ	ENSMSPG00010001052	miRNA gene	Chr15:18382177-18382237 (+)
WSB/EiJ	ENSIUOG00005012138	miRNA gene	Chr15:17891706-17891752 (+)

Homology

• Gene Tree
  Gm54589
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076319 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076319	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183105	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;