Gm54588 Gene Detail

Summary

• Symbol
  Gm54588
• Name
  predicted gene, 54588

• Feature Type
  miRNA gene
• IDs
  MGI:6845654
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:69206292-69206370 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845654	miRNA gene	Chr12:69206292-69206370 (+)
129S1/SvImJ	ENSMUSG00200032118	miRNA gene	Chr12:61121277-61121355 (+)
A/J	ENSMUSG00195015115	miRNA gene	Chr12:63814706-63814785 (+)
AKR/J	ENSMUSG00220015173	miRNA gene	Chr12:61606020-61606098 (+)
BALB/cJ	ENSMUSG00180033518	miRNA gene	Chr12:62813785-62813864 (+)
C3H/HeJ	ENSMUSG00175028863	miRNA gene	Chr12:65908226-65908305 (+)
C57BL/6NJ	ENSMUSG00215030832	miRNA gene	Chr12:62189886-62189964 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036824	miRNA gene	Chr12:62158961-62159039 (+)
CBA/J	ENSMUSG00210031989	miRNA gene	Chr12:62378180-62378259 (+)
DBA/2J	ENSMUSG00185004921	miRNA gene	Chr12:64268384-64268462 (+)
FVB/NJ	ENSMUSG00205035865	miRNA gene	Chr12:62000529-62000608 (+)
JF1/MsJ	ENSUMUG00000028275	miRNA gene	Chr12:68237115-68237193 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012859	miRNA gene	Chr12:61427262-61427340 (+)
NZO/HlLtJ	ENSMUSG00225038556	miRNA gene	Chr12:73323362-73323440 (+)
PWK/PhJ	ENSLUMG00010034426	miRNA gene	Chr12:62323613-62323691 (+)
SPRET/EiJ	ENSMSPG00010030346	miRNA gene	Chr12:64010745-64010823 (+)
WSB/EiJ	ENSIUOG00005012928	miRNA gene	Chr12:62067215-62067293 (+)

Homology

• Gene Tree
  Gm54588
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075000 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075000	Ensembl Gene Model | MGI Sequence Detail	79	C57BL/6J
transcript	ENSMUST00020183101	Ensembl | MGI Sequence Detail	79	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;