Gm54587 Gene Detail

Summary

• Symbol
  Gm54587
• Name
  predicted gene, 54587

• Feature Type
  miRNA gene
• IDs
  MGI:6845652
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:69206211-69206280 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845652	miRNA gene	Chr12:69206211-69206280 (+)
129S1/SvImJ	ENSMUSG00200032101	miRNA gene	Chr12:61121196-61121265 (+)
A/J	ENSMUSG00195015094	miRNA gene	Chr12:63814625-63814694 (+)
AKR/J	ENSMUSG00220015167	miRNA gene	Chr12:61605939-61606008 (+)
BALB/cJ	ENSMUSG00180033484	miRNA gene	Chr12:62813704-62813773 (+)
C3H/HeJ	ENSMUSG00175028821	miRNA gene	Chr12:65908145-65908214 (+)
C57BL/6NJ	ENSMUSG00215030731	miRNA gene	Chr12:62189805-62189874 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036787	miRNA gene	Chr12:62158880-62158949 (+)
CBA/J	ENSMUSG00210031972	miRNA gene	Chr12:62378099-62378168 (+)
DBA/2J	ENSMUSG00185004918	miRNA gene	Chr12:64268303-64268372 (+)
FVB/NJ	ENSMUSG00205035790	miRNA gene	Chr12:62000448-62000517 (+)
JF1/MsJ	ENSUMUG00000028211	miRNA gene	Chr12:68237034-68237103 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012847	miRNA gene	Chr12:61427181-61427250 (+)
NZO/HlLtJ	ENSMUSG00225038344	miRNA gene	Chr12:73323281-73323350 (+)
PWK/PhJ	ENSLUMG00010034386	miRNA gene	Chr12:62323532-62323601 (+)
SPRET/EiJ	ENSMSPG00010030329	miRNA gene	Chr12:64010664-64010733 (+)
WSB/EiJ	ENSIUOG00005012921	miRNA gene	Chr12:62067134-62067203 (+)

Homology

• Gene Tree
  Gm54587
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076451 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076451	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020183515	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;