Gm54577 Gene Detail

Summary

• Symbol
  Gm54577
• Name
  predicted gene, 54577

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845632
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:121131341-121131608 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845632	unclassified non-coding RNA gene	Chr3:121131341-121131608 (+)
129S1/SvImJ	ENSMUSG00200026725	unclassified non-coding RNA gene	Chr3:117814136-117814403 (+)
A/J	ENSMUSG00195015679	unclassified non-coding RNA gene	Chr3:118033168-118033435 (+)
AKR/J	ENSMUSG00220025525	unclassified non-coding RNA gene	Chr3:116425171-116425438 (+)
BALB/cJ	ENSMUSG00180030262	unclassified non-coding RNA gene	Chr3:117969411-117969678 (+)
C3H/HeJ	ENSMUSG00175027775	unclassified non-coding RNA gene	Chr3:117516555-117516822 (+)
C57BL/6NJ	ENSMUSG00215008599	unclassified non-coding RNA gene	Chr3:118264548-118264815 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032842	unclassified non-coding RNA gene	Chr3:118519917-118520184 (+)
CBA/J	ENSMUSG00210003045	unclassified non-coding RNA gene	Chr3:118147518-118147785 (+)
DBA/2J	ENSMUSG00185008463	unclassified non-coding RNA gene	Chr3:118722058-118722325 (+)
FVB/NJ	ENSMUSG00205007578	unclassified non-coding RNA gene	Chr3:117089089-117089356 (+)
JF1/MsJ	ENSUMUG00000003928	unclassified non-coding RNA gene	Chr3:117602202-117602469 (+)
LP/J	ENSMUSG00230011947	unclassified non-coding RNA gene	Chr3:120664817-120665084 (+)
NOD/ShiLtJ	ENSMUSG00190033147	unclassified non-coding RNA gene	Chr3:119100348-119100615 (+)
NZO/HlLtJ	ENSMUSG00225003813	unclassified non-coding RNA gene	Chr3:123159220-123159487 (+)
PWK/PhJ	ENSLUMG00010009417	unclassified non-coding RNA gene	Chr3:117505882-117506149 (+)
SPRET/EiJ	ENSMSPG00010031179	unclassified non-coding RNA gene	Chr3:118237976-118238224 (+)
WSB/EiJ	ENSIUOG00005007371	unclassified non-coding RNA gene	Chr3:118313054-118313321 (+)

Homology

• Gene Tree
  Gm54577
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075985 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075985	Ensembl Gene Model | MGI Sequence Detail	268	C57BL/6J
transcript	ENSMUST00020183597	Ensembl | MGI Sequence Detail	268	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;