Gm54576 Gene Detail

Summary

• Symbol
  Gm54576
• Name
  predicted gene, 54576

• Feature Type
  miRNA gene
• IDs
  MGI:6845630
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:14735139-14735370 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845630	miRNA gene	Chr15:14735139-14735370 (-)
129S1/SvImJ	ENSMUSG00200004471	miRNA gene	Chr15:11754508-11754742 (-)
A/J	ENSMUSG00195011700	miRNA gene	Chr15:11630832-11631063 (-)
AKR/J	ENSMUSG00220001729	miRNA gene	Chr15:11554799-11555033 (-)
BALB/cJ	ENSMUSG00180009941	miRNA gene	Chr15:11648211-11648451 (-)
C3H/HeJ	ENSMUSG00175002015	miRNA gene	Chr15:11805226-11805475 (-)
C57BL/6NJ	ENSMUSG00215008299	miRNA gene	Chr15:11668509-11668740 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002660	miRNA gene	Chr15:11769727-11769958 (-)
CBA/J	ENSMUSG00210005001	miRNA gene	Chr15:11796852-11797101 (-)
DBA/2J	ENSMUSG00185003482	miRNA gene	Chr15:11747428-11747677 (-)
FVB/NJ	ENSMUSG00205010805	miRNA gene	Chr15:11630364-11630595 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230016530	miRNA gene	Chr15:15230049-15230283 (-)
NOD/ShiLtJ	ENSMUSG00190002229	miRNA gene	Chr15:11691703-11691952 (-)
NZO/HlLtJ	ENSMUSG00225024314	miRNA gene	Chr15:15442020-15442269 (-)
PWK/PhJ	ENSLUMG00010015129	miRNA gene	Chr15:11921920-11922166 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005012315	miRNA gene	Chr15:11727263-11727494 (-)

Homology

• Gene Tree
  Gm54576
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075345 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075345	Ensembl Gene Model | MGI Sequence Detail	232	C57BL/6J
transcript	ENSMUST00020182053	Ensembl | MGI Sequence Detail	232	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;