Gm54574 Gene Detail

Summary

• Symbol
  Gm54574
• Name
  predicted gene, 54574

• Feature Type
  rRNA gene
• IDs
  MGI:6845626
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:29085179-29085293 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845626	rRNA gene	Chr12:29085179-29085293 (-)
129S1/SvImJ	ENSMUSG00200016202	rRNA gene	Chr12:20894091-20894204 (-)
A/J	ENSMUSG00195022453	rRNA gene	Chr12:23592282-23592396 (-)
AKR/J	ENSMUSG00220034475	rRNA gene	Chr12:21562302-21562415 (-)
BALB/cJ	ENSMUSG00180028514	rRNA gene	Chr12:22591387-22591501 (-)
C3H/HeJ	ENSMUSG00175022375	rRNA gene	Chr12:25624974-25625088 (-)
C57BL/6NJ	ENSMUSG00215025973	rRNA gene	Chr12:22007984-22008098 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010796	rRNA gene	Chr12:22423427-22423541 (-)
CBA/J	ENSMUSG00210008874	rRNA gene	Chr12:22114346-22114460 (-)
DBA/2J	ENSMUSG00185015650	rRNA gene	Chr12:24127265-24127378 (-)
FVB/NJ	ENSMUSG00205006573	rRNA gene	Chr12:22154025-22154139 (-)
JF1/MsJ	ENSUMUG00000007447	rRNA gene	Chr12:28317266-28317380 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190019696	rRNA gene	Chr12:21059188-21059301 (-)
NZO/HlLtJ	ENSMUSG00225032067	rRNA gene	Chr12:33284998-33285112 (-)
PWK/PhJ	ENSLUMG00010011269	rRNA gene	Chr12:22558122-22558236 (-)
SPRET/EiJ	ENSMSPG00010006345	rRNA gene	Chr12:22990620-22990734 (-)
WSB/EiJ	ENSIUOG00005020602	rRNA gene	Chr12:21755112-21755226 (-)

Homology

• Gene Tree
  Gm54574
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076657 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076657	Ensembl Gene Model | MGI Sequence Detail	115	C57BL/6J
transcript	ENSMUST00020182194	Ensembl | MGI Sequence Detail	115	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;