Gm54572 Gene Detail

Summary

• Symbol
  Gm54572
• Name
  predicted gene, 54572

• Feature Type
  miRNA gene
• IDs
  MGI:6845622
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113388344-113388403 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845622	miRNA gene	Chr12:113388344-113388403 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195048574	miRNA gene	Chr12:107673239-107673298 (-)
AKR/J	ENSMUSG00220036727	miRNA gene	Chr12:105603389-105603448 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175041548	miRNA gene	Chr12:109525324-109525382 (-)
C57BL/6NJ	ENSMUSG00215048232	miRNA gene	Chr12:106212488-106212547 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041405	miRNA gene	Chr12:105845950-105846009 (-)
CBA/J	ENSMUSG00210035210	miRNA gene	Chr12:106581774-106581832 (-)
DBA/2J	ENSMUSG00185034748	miRNA gene	Chr12:108399847-108399906 (-)
FVB/NJ	ENSMUSG00205040609	miRNA gene	Chr12:105613466-105613524 (-)
JF1/MsJ	ENSUMUG00000022942	miRNA gene	Chr12:113186479-113186538 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190037327	miRNA gene	Chr12:105023572-105023631 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010021747	miRNA gene	Chr12:108893503-108893567 (-)
WSB/EiJ	ENSIUOG00005037359	miRNA gene	Chr12:105901610-105901669 (-)

Homology

• Gene Tree
  Gm54572
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002074884 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074884	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020182319	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;