Gm54571 Gene Detail

Summary

• Symbol
  Gm54571
• Name
  predicted gene, 54571

• Feature Type
  miRNA gene
• IDs
  MGI:6845620
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113388339-113388408 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845620	miRNA gene	Chr12:113388339-113388408 (-)
129S1/SvImJ	ENSMUSG00200027794	miRNA gene	Chr12:105176206-105176380 (-)
A/J	ENSMUSG00195048027	miRNA gene	Chr12:107673214-107673792 (-)
AKR/J	ENSMUSG00220037271	miRNA gene	Chr12:105602041-105602314 (-)
BALB/cJ	ENSMUSG00180050885	miRNA gene	Chr12:106944797-106944971 (-)
C3H/HeJ	ENSMUSG00175047414	miRNA gene	Chr12:109525318-109525527 (-)
C57BL/6NJ	ENSMUSG00215048656	miRNA gene	Chr12:106212483-106212552 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041610	miRNA gene	Chr12:105845770-105845839 (-)
CBA/J	ENSMUSG00210034755	miRNA gene	Chr12:106581768-106581977 (-)
DBA/2J	ENSMUSG00185035167	miRNA gene	Chr12:108399842-108399911 (-)
FVB/NJ	ENSMUSG00205040116	miRNA gene	Chr12:105612919-105612988 (-)
JF1/MsJ	ENSUMUG00000033985	miRNA gene	Chr12:113186474-113186543 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190029670	miRNA gene	Chr12:105021630-105021699 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010020840	miRNA gene	Chr12:108893014-108893612 (-)
WSB/EiJ	ENSIUOG00005037064	miRNA gene	Chr12:105900279-105900348 (-)

Homology

• Gene Tree
  Gm54571
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002075660 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075660	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020183398	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;