Gm54569 Gene Detail

Summary

• Symbol
  Gm54569
• Name
  predicted gene, 54569

• Feature Type
  rRNA gene
• IDs
  MGI:6845616
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:12980915-12981014 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845616	rRNA gene	Chr15:12980915-12981014 (+)
129S1/SvImJ	ENSMUSG00200034545	rRNA gene	Chr15:9967458-9967557 (+)
A/J	ENSMUSG00195010328	rRNA gene	Chr15:9871588-9871687 (+)
AKR/J	ENSMUSG00220022876	rRNA gene	Chr15:9800433-9800532 (+)
BALB/cJ	ENSMUSG00180035177	rRNA gene	Chr15:9883128-9883227 (+)
C3H/HeJ	ENSMUSG00175002047	rRNA gene	Chr15:10040240-10040339 (+)
C57BL/6NJ	ENSMUSG00215025742	rRNA gene	Chr15:9914186-9914285 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026603	rRNA gene	Chr15:10003436-10003535 (+)
CBA/J	ENSMUSG00210004816	rRNA gene	Chr15:10025306-10025405 (+)
DBA/2J	ENSMUSG00185032680	rRNA gene	Chr15:9982390-9982489 (+)
FVB/NJ	ENSMUSG00205032287	rRNA gene	Chr15:9852582-9852681 (+)
JF1/MsJ	ENSUMUG00000013851	rRNA gene	Chr15:10086336-10086435 (+)
LP/J	ENSMUSG00230016547	rRNA gene	Chr15:13460446-13460545 (+)
NOD/ShiLtJ	ENSMUSG00190010135	rRNA gene	Chr15:9938368-9938467 (+)
NZO/HlLtJ	ENSMUSG00225024317	rRNA gene	Chr15:13691854-13691953 (+)
PWK/PhJ	ENSLUMG00010014835	rRNA gene	Chr15:10141776-10141875 (+)
SPRET/EiJ	ENSMSPG00010001040	rRNA gene	Chr15:10181163-10181262 (+)
WSB/EiJ	ENSIUOG00005030584	rRNA gene	Chr15:9955828-9955927 (+)

Homology

• Gene Tree
  Gm54569
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075612 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075612	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020183451	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;