Gm54568 Gene Detail

Summary

• Symbol
  Gm54568
• Name
  predicted gene, 54568

• Feature Type
  miRNA gene
• IDs
  MGI:6845614
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:12842182-12842321 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845614	miRNA gene	Chr15:12842182-12842321 (+)
129S1/SvImJ	ENSMUSG00200034572	miRNA gene	Chr15:9829667-9829806 (+)
A/J	ENSMUSG00195010343	miRNA gene	Chr15:9734158-9734297 (+)
AKR/J	ENSMUSG00220022904	miRNA gene	Chr15:9661642-9661781 (+)
BALB/cJ	ENSMUSG00180035257	miRNA gene	Chr15:9732253-9732392 (+)
C3H/HeJ	ENSMUSG00175034051	miRNA gene	Chr15:9889384-9889523 (+)
C57BL/6NJ	ENSMUSG00215025882	miRNA gene	Chr15:9775404-9775543 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026634	miRNA gene	Chr15:9867553-9867692 (+)
CBA/J	ENSMUSG00210025801	miRNA gene	Chr15:9874431-9874570 (+)
DBA/2J	ENSMUSG00185032722	miRNA gene	Chr15:9831502-9831641 (+)
FVB/NJ	ENSMUSG00205032402	miRNA gene	Chr15:9715192-9715331 (+)
JF1/MsJ	ENSUMUG00000036597	miRNA gene	Chr15:9949602-9949741 (+)
LP/J	ENSMUSG00230015689	miRNA gene	Chr15:13322638-13322777 (+)
NOD/ShiLtJ	ENSMUSG00190010170	miRNA gene	Chr15:9800553-9800692 (+)
NZO/HlLtJ	ENSMUSG00225024131	miRNA gene	Chr15:13554027-13554166 (+)
PWK/PhJ	ENSLUMG00010035886	miRNA gene	Chr15:10004816-10004955 (+)
SPRET/EiJ	ENSMSPG00010001042	miRNA gene	Chr15:10026080-10026219 (+)
WSB/EiJ	ENSIUOG00005030633	miRNA gene	Chr15:9818893-9819032 (+)

Homology

• Gene Tree
  Gm54568
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075079 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075079	Ensembl Gene Model | MGI Sequence Detail	140	C57BL/6J
transcript	ENSMUST00020182889	Ensembl | MGI Sequence Detail	140	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;