Gm54566 Gene Detail

Summary

• Symbol
  Gm54566
• Name
  predicted gene, 54566

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845610
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:34707327-34707434 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  40 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845610	unclassified non-coding RNA gene	Chr3:34707327-34707434 (+)
129S1/SvImJ	ENSMUSG00200007128	unclassified non-coding RNA gene	Chr3:31439710-31439817 (+)
A/J	ENSMUSG00195001467	unclassified non-coding RNA gene	Chr3:31439045-31439152 (+)
AKR/J	ENSMUSG00220000957	unclassified non-coding RNA gene	Chr3:31476709-31476816 (+)
BALB/cJ	ENSMUSG00180002850	unclassified non-coding RNA gene	Chr3:31559290-31559397 (+)
C3H/HeJ	ENSMUSG00175003727	unclassified non-coding RNA gene	Chr3:31469310-31469417 (+)
C57BL/6NJ	ENSMUSG00215001612	unclassified non-coding RNA gene	Chr3:31833308-31833415 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026243	unclassified non-coding RNA gene	Chr3:31324514-31324621 (+)
CBA/J	ENSMUSG00210001576	unclassified non-coding RNA gene	Chr3:31517526-31517633 (+)
DBA/2J	ENSMUSG00185001635	unclassified non-coding RNA gene	Chr3:31762543-31762650 (+)
FVB/NJ	ENSMUSG00205008718	unclassified non-coding RNA gene	Chr3:30942066-30942173 (+)
JF1/MsJ	ENSUMUG00000004790	unclassified non-coding RNA gene	Chr3:31206470-31206577 (+)
LP/J	ENSMUSG00230024193	unclassified non-coding RNA gene	Chr3:33682744-33682851 (+)
NOD/ShiLtJ	ENSMUSG00190001659	unclassified non-coding RNA gene	Chr3:31749352-31749459 (+)
NZO/HlLtJ	ENSMUSG00225007118	unclassified non-coding RNA gene	Chr3:36300768-36300875 (+)
PWK/PhJ	ENSLUMG00010038293	unclassified non-coding RNA gene	Chr3:31267207-31267314 (+)
SPRET/EiJ	ENSMSPG00010000651	unclassified non-coding RNA gene	Chr3:31642361-31642468 (+)
WSB/EiJ	ENSIUOG00005013905	unclassified non-coding RNA gene	Chr3:31763450-31763557 (+)

Homology

• Gene Tree
  Gm54566
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075836 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075836	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020182624	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;