Gm54563 Gene Detail

Summary

• Symbol
  Gm54563
• Name
  predicted gene, 54563

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845604
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:90947999-90948321 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845604	unclassified non-coding RNA gene	Chr12:90947999-90948321 (+)
129S1/SvImJ	ENSMUSG00200017963	unclassified non-coding RNA gene	Chr12:82775137-82775459 (+)
A/J	ENSMUSG00195035946	unclassified non-coding RNA gene	Chr12:85391425-85391747 (+)
AKR/J	ENSMUSG00220018340	unclassified non-coding RNA gene	Chr12:83048339-83048661 (+)
BALB/cJ	ENSMUSG00180016855	unclassified non-coding RNA gene	Chr12:84420906-84421228 (+)
C3H/HeJ	ENSMUSG00175040498	unclassified non-coding RNA gene	Chr12:87162401-87162723 (+)
C57BL/6NJ	ENSMUSG00215022128	unclassified non-coding RNA gene	Chr12:83719789-83720111 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006467	unclassified non-coding RNA gene	Chr12:83554285-83554607 (+)
CBA/J	ENSMUSG00210019164	unclassified non-coding RNA gene	Chr12:84126112-84126434 (+)
DBA/2J	ENSMUSG00185003074	unclassified non-coding RNA gene	Chr12:85983845-85984167 (+)
FVB/NJ	ENSMUSG00205000805	unclassified non-coding RNA gene	Chr12:83339078-83339400 (+)
JF1/MsJ	ENSUMUG00000052118	unclassified non-coding RNA gene	Chr12:90639682-90640020 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041471	unclassified non-coding RNA gene	Chr12:102017749-102018071 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010003775	unclassified non-coding RNA gene	Chr12:84107791-84108129 (+)
SPRET/EiJ	ENSMSPG00010001190	unclassified non-coding RNA gene	Chr12:86474405-86474727 (+)
WSB/EiJ	ENSIUOG00005002227	unclassified non-coding RNA gene	Chr12:83344368-83344690 (+)

Homology

• Gene Tree
  Gm54563
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076394 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076394	Ensembl Gene Model | MGI Sequence Detail	323	C57BL/6J
transcript	ENSMUST00020182097	Ensembl | MGI Sequence Detail	323	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;