Gm54561 Gene Detail

Summary

• Symbol
  Gm54561
• Name
  predicted gene, 54561

• Feature Type
  miRNA gene
• IDs
  MGI:6845600
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:89265212-89265353 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845600	miRNA gene	Chr12:89265212-89265353 (-)
129S1/SvImJ	ENSMUSG00200051295	miRNA gene	Chr12:81044386-81044527 (-)
A/J	ENSMUSG00195035770	miRNA gene	Chr12:83690847-83690988 (-)
AKR/J	ENSMUSG00220050506	miRNA gene	Chr12:81347843-81347984 (-)
BALB/cJ	ENSMUSG00180016617	miRNA gene	Chr12:82836851-82836992 (-)
C3H/HeJ	ENSMUSG00175039755	miRNA gene	Chr12:85458657-85458798 (-)
C57BL/6NJ	ENSMUSG00215018959	miRNA gene	Chr12:82034166-82034307 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034751	miRNA gene	Chr12:81912990-81913131 (-)
CBA/J	ENSMUSG00210019066	miRNA gene	Chr12:82447258-82447399 (-)
DBA/2J	ENSMUSG00185002975	miRNA gene	Chr12:84286114-84286255 (-)
FVB/NJ	ENSMUSG00205000720	miRNA gene	Chr12:81648625-81648766 (-)
JF1/MsJ	ENSUMUG00000052857	miRNA gene	Chr12:88963906-88964047 (-)
LP/J	ENSMUSG00230047378	miRNA gene	Chr12:91361171-91361312 (-)
NOD/ShiLtJ	ENSMUSG00190042432	miRNA gene	Chr12:103697977-103698118 (+)
NZO/HlLtJ	ENSMUSG00225052922	miRNA gene	Chr12:93133490-93133631 (-)
PWK/PhJ	ENSLUMG00010003735	miRNA gene	Chr12:82447653-82447794 (-)
SPRET/EiJ	ENSMSPG00010001226	miRNA gene	Chr12:84793246-84793387 (-)
WSB/EiJ	ENSIUOG00005047000	miRNA gene	Chr12:81662152-81662293 (-)

Homology

• Gene Tree
  Gm54561
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075591 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075591	Ensembl Gene Model | MGI Sequence Detail	142	C57BL/6J
transcript	ENSMUST00020183292	Ensembl | MGI Sequence Detail	142	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;