Gm54559 Gene Detail

Summary

• Symbol
  Gm54559
• Name
  predicted gene, 54559

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845596
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:93451212-93451489 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845596	unclassified non-coding RNA gene	Chr16:93451212-93451489 (+)
129S1/SvImJ	ENSMUSG00200038160	unclassified non-coding RNA gene	Chr16:90386046-90386326 (+)
A/J	ENSMUSG00195030176	unclassified non-coding RNA gene	Chr16:90143782-90144062 (+)
AKR/J	ENSMUSG00220016260	unclassified non-coding RNA gene	Chr16:90389086-90389366 (+)
BALB/cJ	ENSMUSG00180015718	unclassified non-coding RNA gene	Chr16:90217756-90218036 (+)
C3H/HeJ	ENSMUSG00175017587	unclassified non-coding RNA gene	Chr16:90554908-90555188 (+)
C57BL/6NJ	ENSMUSG00215032457	unclassified non-coding RNA gene	Chr16:90341011-90341288 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021050	unclassified non-coding RNA gene	Chr16:89935055-89935335 (+)
CBA/J	ENSMUSG00210043370	unclassified non-coding RNA gene	Chr16:90462451-90462731 (+)
DBA/2J	ENSMUSG00185034815	unclassified non-coding RNA gene	Chr16:90401838-90402118 (+)
FVB/NJ	ENSMUSG00205027277	unclassified non-coding RNA gene	Chr16:90181354-90181634 (+)
JF1/MsJ	ENSUMUG00000047375	unclassified non-coding RNA gene	Chr16:90555440-90555717 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190027058	unclassified non-coding RNA gene	Chr16:90370355-90370635 (+)
NZO/HlLtJ	ENSMUSG00225031624	unclassified non-coding RNA gene	Chr16:96055733-96056010 (+)
PWK/PhJ	ENSLUMG00010014105	unclassified non-coding RNA gene	Chr16:90194615-90194892 (+)
SPRET/EiJ	ENSMSPG00010021351	unclassified non-coding RNA gene	Chr16:91308333-91308613 (+)
WSB/EiJ	ENSIUOG00005020336	unclassified non-coding RNA gene	Chr16:90302766-90303043 (+)

Homology

• Gene Tree
  Gm54559
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm54559
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075754 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075754	Ensembl Gene Model | MGI Sequence Detail	278	C57BL/6J
transcript	ENSMUST00020182111	Ensembl | MGI Sequence Detail	278	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:343786 Lana-Elola E, et al., Congenital heart defects in Down syndrome are caused by increased dosage of DYRK1A. bioRxiv. 2023;
• Latest
  J:345472 Lana-Elola E, et al., Increased dosage of DYRK1A leads to congenital heart defects in a mouse model of Down syndrome. Sci Transl Med. 2024 Jan 24;16(731):eadd6883