Gm54556 Gene Detail

Summary

• Symbol
  Gm54556
• Name
  predicted gene, 54556

• Feature Type
  miRNA gene
• IDs
  MGI:6845590
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:24118690-24118818 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845590	miRNA gene	Chr13:24118690-24118818 (-)
129S1/SvImJ	ENSMUSG00200031280	miRNA gene	Chr13:21249209-21249337 (-)
A/J	ENSMUSG00195039451	miRNA gene	Chr13:20398384-20398512 (-)
AKR/J	ENSMUSG00220013085	miRNA gene	Chr13:20219523-20219651 (-)
BALB/cJ	ENSMUSG00180024524	miRNA gene	Chr13:20716895-20717023 (-)
C3H/HeJ	ENSMUSG00175032950	miRNA gene	Chr13:20723097-20723225 (-)
C57BL/6NJ	ENSMUSG00215014362	miRNA gene	Chr13:20875933-20876061 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010721	miRNA gene	Chr13:20896980-20897108 (-)
CBA/J	ENSMUSG00210026991	miRNA gene	Chr13:20678380-20678508 (-)
DBA/2J	ENSMUSG00185021104	miRNA gene	Chr13:21500380-21500508 (-)
FVB/NJ	ENSMUSG00205029540	miRNA gene	Chr13:20518806-20518934 (-)
JF1/MsJ	ENSUMUG00000022736	miRNA gene	Chr13:21165215-21165343 (-)
LP/J	ENSMUSG00230020420	miRNA gene	Chr13:30824504-30824632 (-)
NOD/ShiLtJ	ENSMUSG00190037582	miRNA gene	Chr13:20495777-20495905 (-)
NZO/HlLtJ	ENSMUSG00225045593	miRNA gene	Chr13:24612801-24612929 (-)
PWK/PhJ	ENSLUMG00010032352	miRNA gene	Chr13:20056577-20056705 (-)
SPRET/EiJ	ENSMSPG00010020883	miRNA gene	Chr13:19833920-19834048 (-)
WSB/EiJ	ENSIUOG00005016696	miRNA gene	Chr13:20020313-20020441 (-)

Homology

• Gene Tree
  Gm54556
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075403 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075403	Ensembl Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	ENSMUST00020183036	Ensembl | MGI Sequence Detail	129	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;