Gm54555 Gene Detail

Summary

• Symbol
  Gm54555
• Name
  predicted gene, 54555

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845588
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:45448130-45448472 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845588	unclassified non-coding RNA gene	Chr13:45448130-45448472 (-)
129S1/SvImJ	ENSMUSG00200036781	unclassified non-coding RNA gene	Chr13:42694659-42695001 (-)
A/J	ENSMUSG00195030685	unclassified non-coding RNA gene	Chr13:41754832-41755174 (-)
AKR/J	ENSMUSG00220009449	unclassified non-coding RNA gene	Chr13:41567836-41568178 (-)
BALB/cJ	ENSMUSG00180008841	unclassified non-coding RNA gene	Chr13:42061357-42061699 (-)
C3H/HeJ	ENSMUSG00175031381	unclassified non-coding RNA gene	Chr13:42025676-42026018 (-)
C57BL/6NJ	ENSMUSG00215007365	unclassified non-coding RNA gene	Chr13:42191913-42192255 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031798	unclassified non-coding RNA gene	Chr13:42100072-42100414 (-)
CBA/J	ENSMUSG00210028649	unclassified non-coding RNA gene	Chr13:42031191-42031533 (-)
DBA/2J	ENSMUSG00185033177	unclassified non-coding RNA gene	Chr13:42851239-42851581 (-)
FVB/NJ	ENSMUSG00205013281	unclassified non-coding RNA gene	Chr13:41783113-41783455 (-)
JF1/MsJ	ENSUMUG00000018107	unclassified non-coding RNA gene	Chr13:42390154-42390495 (-)
LP/J	ENSMUSG00230030828	unclassified non-coding RNA gene	Chr13:52163489-52163831 (-)
NOD/ShiLtJ	ENSMUSG00190012767	unclassified non-coding RNA gene	Chr13:42250148-42250490 (-)
NZO/HlLtJ	ENSMUSG00225036410	unclassified non-coding RNA gene	Chr13:45932214-45932556 (-)
PWK/PhJ	ENSLUMG00010021845	unclassified non-coding RNA gene	Chr13:41218644-41218986 (-)
SPRET/EiJ	ENSMSPG00010032514	unclassified non-coding RNA gene	Chr13:41313339-41313679 (-)
WSB/EiJ	ENSIUOG00005028158	unclassified non-coding RNA gene	Chr13:41373241-41373583 (-)

Homology

• Gene Tree
  Gm54555
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076563 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076563	Ensembl Gene Model | MGI Sequence Detail	343	C57BL/6J
transcript	ENSMUST00020183114	Ensembl | MGI Sequence Detail	343	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;