Gm54554 Gene Detail

Summary

• Symbol
  Gm54554
• Name
  predicted gene, 54554

• Feature Type
  rRNA gene
• IDs
  MGI:6845586
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:28110390-28110527 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845586	rRNA gene	Chr12:28110390-28110527 (-)
129S1/SvImJ	ENSMUSG00200023592	rRNA gene	Chr12:19898925-19899062 (-)
A/J	ENSMUSG00195022286	rRNA gene	Chr12:22608211-22608348 (-)
AKR/J	ENSMUSG00220033020	rRNA gene	Chr12:20563321-20563458 (-)
BALB/cJ	ENSMUSG00180025687	rRNA gene	Chr12:21550870-21551007 (-)
C3H/HeJ	ENSMUSG00175022660	rRNA gene	Chr12:24637835-24637972 (-)
C57BL/6NJ	ENSMUSG00215023687	rRNA gene	Chr12:21024246-21024383 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010423	rRNA gene	Chr12:21427149-21427286 (-)
CBA/J	ENSMUSG00210008581	rRNA gene	Chr12:21125679-21125816 (-)
DBA/2J	ENSMUSG00185015920	rRNA gene	Chr12:23137965-23138102 (-)
FVB/NJ	ENSMUSG00205006434	rRNA gene	Chr12:21179144-21179281 (-)
JF1/MsJ	ENSUMUG00000006489	rRNA gene	Chr12:27333054-27333191 (-)
LP/J	ENSMUSG00230024899	rRNA gene	Chr12:30102613-30102750 (-)
NOD/ShiLtJ	ENSMUSG00190013701	rRNA gene	Chr12:20058083-20058220 (-)
NZO/HlLtJ	ENSMUSG00225032071	rRNA gene	Chr12:32295705-32295842 (-)
PWK/PhJ	ENSLUMG00010011437	rRNA gene	Chr12:21572095-21572232 (-)
SPRET/EiJ	ENSMSPG00010006215	rRNA gene	Chr12:21980131-21980268 (-)
WSB/EiJ	ENSIUOG00005020982	rRNA gene	Chr12:20749094-20749231 (-)

Homology

• Gene Tree
  Gm54554
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075242 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075242	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020182780	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;