Gm54553 Gene Detail

Summary

• Symbol
  Gm54553
• Name
  predicted gene, 54553

• Feature Type
  miRNA gene
• IDs
  MGI:6845584
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:92869643-92869710 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845584	miRNA gene	Chr16:92869643-92869710 (+)
129S1/SvImJ	ENSMUSG00200038938	miRNA gene	Chr16:89799579-89799646 (+)
A/J	ENSMUSG00195029713	miRNA gene	Chr16:89557283-89557350 (+)
AKR/J	ENSMUSG00220016195	miRNA gene	Chr16:89802524-89802591 (+)
BALB/cJ	ENSMUSG00180015622	miRNA gene	Chr16:89631286-89631353 (+)
C3H/HeJ	ENSMUSG00175016515	miRNA gene	Chr16:89968488-89968555 (+)
C57BL/6NJ	ENSMUSG00215037668	miRNA gene	Chr16:89759170-89759237 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019887	miRNA gene	Chr16:89315197-89315264 (+)
CBA/J	ENSMUSG00210044346	miRNA gene	Chr16:89876011-89876078 (+)
DBA/2J	ENSMUSG00185036339	miRNA gene	Chr16:89819135-89819202 (+)
FVB/NJ	ENSMUSG00205027050	miRNA gene	Chr16:89594887-89594954 (+)
JF1/MsJ	ENSUMUG00000044678	miRNA gene	Chr16:89973830-89973897 (+)
LP/J	ENSMUSG00230034416	miRNA gene	Chr16:92346262-92346329 (+)
NOD/ShiLtJ	ENSMUSG00190026472	miRNA gene	Chr16:89783934-89784001 (+)
NZO/HlLtJ	ENSMUSG00225031684	miRNA gene	Chr16:95470518-95470585 (+)
PWK/PhJ	ENSLUMG00010013971	miRNA gene	Chr16:89606888-89606955 (+)
SPRET/EiJ	ENSMSPG00010030017	miRNA gene	Chr16:90728434-90728501 (+)
WSB/EiJ	ENSIUOG00005021748	miRNA gene	Chr16:89701481-89701548 (+)

Homology

• Gene Tree
  Gm54553
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075263 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075263	Ensembl Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	ENSMUST00020181686	Ensembl | MGI Sequence Detail	68	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;