Gm54547 Gene Detail

Summary

• Symbol
  Gm54547
• Name
  predicted gene, 54547

• Feature Type
  miRNA gene
• IDs
  MGI:6845572
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:70004966-70005075 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  197 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845572	miRNA gene	Chr6:70004966-70005075 (-)
129S1/SvImJ	ENSMUSG00200013867	miRNA gene	Chr6:66910258-66910367 (-)
A/J	ENSMUSG00195045967	miRNA gene	Chr6:66669945-66670054 (-)
AKR/J	ENSMUSG00220045034	miRNA gene	Chr6:65735513-65735622 (-)
BALB/cJ	ENSMUSG00180043535	miRNA gene	Chr6:67025824-67025933 (-)
C3H/HeJ	ENSMUSG00175013093	miRNA gene	Chr6:110429933-110430042 (+)
C57BL/6NJ	ENSMUSG00215043570	miRNA gene	Chr6:66994822-66994931 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210042372	miRNA gene	Chr6:66817635-66817744 (-)
DBA/2J	ENSMUSG00185045017	miRNA gene	Chr6:67382851-67382960 (-)
FVB/NJ	ENSMUSG00205043505	miRNA gene	Chr6:66366870-66366979 (-)
JF1/MsJ	ENSUMUG00000046129	miRNA gene	Chr6:66457534-66457643 (-)
LP/J	ENSMUSG00230028648	miRNA gene	Chr6:68503132-68503241 (-)
NOD/ShiLtJ	ENSMUSG00190038974	miRNA gene	Chr6:66398246-66398355 (-)
NZO/HlLtJ	ENSMUSG00225020333	miRNA gene	Chr6:70476997-70477106 (-)
PWK/PhJ	ENSLUMG00010023701	miRNA gene	Chr6:65797883-65797992 (-)
SPRET/EiJ	ENSMSPG00010027711	miRNA gene	Chr6:67837105-67837214 (-)
WSB/EiJ	ENSIUOG00005026384	miRNA gene	Chr6:67665111-67665220 (-)

Homology

• Gene Tree
  Gm54547
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076017 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076017	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182510	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;