Gm54544 Gene Detail

Summary

• Symbol
  Gm54544
• Name
  predicted gene, 54544

• Feature Type
  snoRNA gene
• IDs
  MGI:6845567
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:44991641-44991759 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845567	snoRNA gene	Chr13:44991641-44991759 (-)
129S1/SvImJ	ENSMUSG00200036823	snoRNA gene	Chr13:42244784-42244902 (-)
A/J	ENSMUSG00195029982	snoRNA gene	Chr13:41304890-41305008 (-)
AKR/J	ENSMUSG00220009839	snoRNA gene	Chr13:41107007-41107125 (-)
BALB/cJ	ENSMUSG00180008945	snoRNA gene	Chr13:41611464-41611582 (-)
C3H/HeJ	ENSMUSG00175030294	snoRNA gene	Chr13:41575777-41575895 (-)
C57BL/6NJ	ENSMUSG00215006760	snoRNA gene	Chr13:41735367-41735485 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032229	snoRNA gene	Chr13:41635871-41635989 (-)
CBA/J	ENSMUSG00210028757	snoRNA gene	Chr13:41581348-41581466 (-)
DBA/2J	ENSMUSG00185032719	snoRNA gene	Chr13:42390448-42390566 (-)
FVB/NJ	ENSMUSG00205013796	snoRNA gene	Chr13:41333213-41333331 (-)
JF1/MsJ	ENSUMUG00000016771	snoRNA gene	Chr13:41926369-41926487 (-)
LP/J	ENSMUSG00230030532	snoRNA gene	Chr13:51713657-51713775 (-)
NOD/ShiLtJ	ENSMUSG00190012405	snoRNA gene	Chr13:41789384-41789502 (-)
NZO/HlLtJ	ENSMUSG00225036310	snoRNA gene	Chr13:45480851-45480969 (-)
PWK/PhJ	ENSLUMG00010022100	snoRNA gene	Chr13:40768813-40768931 (-)
SPRET/EiJ	ENSMSPG00010031283	snoRNA gene	Chr13:40845346-40845464 (-)
WSB/EiJ	ENSIUOG00005027895	snoRNA gene	Chr13:40917241-40917359 (-)

Homology

• Gene Tree
  Gm54544
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075018 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075018	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020183788	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;