Gm54543 Gene Detail

Summary

• Symbol
  Gm54543
• Name
  predicted gene, 54543

• Feature Type
  snRNA gene
• IDs
  MGI:6845565
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:87010726-87010835 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845565	snRNA gene	Chr17:87010726-87010835 (-)
129S1/SvImJ	ENSMUSG00200023200	snRNA gene	Chr17:82416140-82416249 (-)
A/J	ENSMUSG00195029571	snRNA gene	Chr17:83795645-83795754 (-)
AKR/J	ENSMUSG00220016604	snRNA gene	Chr17:82747052-82747161 (-)
BALB/cJ	ENSMUSG00180026301	snRNA gene	Chr17:83467850-83467959 (-)
C3H/HeJ	ENSMUSG00175007204	snRNA gene	Chr17:82733710-82733819 (-)
C57BL/6NJ	ENSMUSG00215023947	snRNA gene	Chr17:82454249-82454358 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011879	snRNA gene	Chr17:83289906-83290015 (-)
CBA/J	ENSMUSG00210022305	snRNA gene	Chr17:82592414-82592523 (-)
DBA/2J	ENSMUSG00185020602	snRNA gene	Chr17:85411911-85412020 (-)
FVB/NJ	ENSMUSG00205006051	snRNA gene	Chr17:83221159-83221268 (-)
JF1/MsJ	ENSUMUG00000016421	snRNA gene	Chr17:85148309-85148418 (-)
LP/J	ENSMUSG00230010944	snRNA gene	Chr17:86440199-86440308 (-)
NOD/ShiLtJ	ENSMUSG00190010058	snRNA gene	Chr17:82490081-82490190 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010032233	snRNA gene	Chr17:82356945-82357054 (-)
SPRET/EiJ	ENSMSPG00010020532	snRNA gene	Chr17:82947498-82947607 (-)
WSB/EiJ	ENSIUOG00005022746	snRNA gene	Chr17:83413243-83413352 (-)

Homology

• Gene Tree
  Gm54543
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076026 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076026	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020181955	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;