Gm54538 Gene Detail

Summary

• Symbol
  Gm54538
• Name
  predicted gene, 54538

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845555
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:132276966-132277302 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845555	unclassified non-coding RNA gene	ChrX:132276966-132277302 (-)
129S1/SvImJ	ENSMUSG00200011658	unclassified non-coding RNA gene	ChrX:111317409-111317744 (-)
A/J	ENSMUSG00195048577	unclassified non-coding RNA gene	ChrX:115178841-115179176 (-)
AKR/J	ENSMUSG00220013154	unclassified non-coding RNA gene	ChrX:108791851-108792186 (-)
BALB/cJ	ENSMUSG00180019771	unclassified non-coding RNA gene	ChrX:111604237-111604572 (-)
C3H/HeJ	ENSMUSG00175035651	unclassified non-coding RNA gene	ChrX:115452697-115453032 (-)
C57BL/6NJ	ENSMUSG00215002791	unclassified non-coding RNA gene	ChrX:111982796-111983132 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041120	unclassified non-coding RNA gene	ChrX:112788695-112789031 (-)
CBA/J	ENSMUSG00210043736	unclassified non-coding RNA gene	ChrX:112354312-112354647 (-)
DBA/2J	ENSMUSG00185030653	unclassified non-coding RNA gene	ChrX:126283097-126283433 (-)
FVB/NJ	ENSMUSG00205012528	unclassified non-coding RNA gene	ChrX:110994085-110994421 (-)
JF1/MsJ	ENSUMUG00000028999	unclassified non-coding RNA gene	ChrX:145452357-145452696 (-)
LP/J	ENSMUSG00230041264	unclassified non-coding RNA gene	ChrX:132967495-132967830 (-)
NOD/ShiLtJ	ENSMUSG00190014813	unclassified non-coding RNA gene	ChrX:111799069-111799405 (-)
NZO/HlLtJ	ENSMUSG00225037184	unclassified non-coding RNA gene	ChrX:137622414-137622750 (-)
PWK/PhJ	ENSLUMG00010009283	unclassified non-coding RNA gene	ChrX:110106352-110106690 (-)
SPRET/EiJ	ENSMSPG00010040461	unclassified non-coding RNA gene	ChrX:114915334-114915668 (-)
WSB/EiJ	ENSIUOG00005038495	unclassified non-coding RNA gene	ChrX:112538772-112539108 (-)

Homology

• Gene Tree
  Gm54538
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076200 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076200	Ensembl Gene Model | MGI Sequence Detail	337	C57BL/6J
transcript	ENSMUST00020183538	Ensembl | MGI Sequence Detail	337	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;