Gm54536 Gene Detail

Summary

• Symbol
  Gm54536
• Name
  predicted gene, 54536

• Feature Type
  miRNA gene
• IDs
  MGI:6845551
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:129788418-129788527 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845551	miRNA gene	ChrX:129788418-129788527 (-)
129S1/SvImJ	ENSMUSG00200011777	miRNA gene	ChrX:108800065-108800174 (-)
A/J	ENSMUSG00195021142	miRNA gene	ChrX:112672582-112672691 (-)
AKR/J	ENSMUSG00220032840	miRNA gene	Chr9:106177906-106178011 (-)
AKR/J	ENSMUSG00220013079	miRNA gene	ChrX:106269455-106269564 (-)
BALB/cJ	ENSMUSG00180019303	miRNA gene	ChrX:109097989-109098098 (-)
C3H/HeJ	ENSMUSG00175021682	miRNA gene	ChrX:112946510-112946619 (-)
C57BL/6NJ	ENSMUSG00215002740	miRNA gene	ChrX:109491187-109491296 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008112	miRNA gene	ChrX:110190388-110190497 (-)
CBA/J	ENSMUSG00210020816	miRNA gene	ChrX:109848132-109848241 (-)
DBA/2J	ENSMUSG00185029980	miRNA gene	ChrX:123776472-123776581 (-)
FVB/NJ	ENSMUSG00205012347	miRNA gene	ChrX:108476733-108476842 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230004112	miRNA gene	ChrX:130450250-130450359 (-)
NOD/ShiLtJ	ENSMUSG00190014943	miRNA gene	ChrX:109287994-109288103 (-)
NZO/HlLtJ	ENSMUSG00225037205	miRNA gene	ChrX:135115915-135116024 (-)
NZO/HlLtJ	ENSMUSG00225024865	miRNA gene	Chr9:106931411-106931516 (-)
PWK/PhJ	ENSLUMG00010009425	miRNA gene	ChrX:107570441-107570550 (-)
SPRET/EiJ	ENSMSPG00010021304	miRNA gene	ChrX:112272817-112272926 (-)
WSB/EiJ	ENSIUOG00005005031	miRNA gene	ChrX:110053715-110053824 (-)

Homology

• Gene Tree
  Gm54536
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076166 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076166	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183296	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;