Gm54534 Gene Detail

Summary

• Symbol
  Gm54534
• Name
  predicted gene, 54534

• Feature Type
  miRNA gene
• IDs
  MGI:6845547
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:91740959-91741036 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845547	miRNA gene	Chr16:91740959-91741036 (-)
129S1/SvImJ	ENSMUSG00200038018	miRNA gene	Chr16:88669903-88669980 (-)
A/J	ENSMUSG00195028951	miRNA gene	Chr16:88427103-88427180 (-)
AKR/J	ENSMUSG00220016080	miRNA gene	Chr16:88621777-88621854 (-)
BALB/cJ	ENSMUSG00180015104	miRNA gene	Chr16:88501182-88501259 (-)
C3H/HeJ	ENSMUSG00175016683	miRNA gene	Chr16:88838522-88838599 (-)
C57BL/6NJ	ENSMUSG00215037026	miRNA gene	Chr16:88629584-88629661 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020649	miRNA gene	Chr16:88180591-88180668 (-)
CBA/J	ENSMUSG00210041130	miRNA gene	Chr16:88742116-88742193 (-)
DBA/2J	ENSMUSG00185035899	miRNA gene	Chr16:88689158-88689235 (-)
FVB/NJ	ENSMUSG00205028784	miRNA gene	Chr16:88464233-88464310 (-)
JF1/MsJ	ENSUMUG00000045158	miRNA gene	Chr16:88829342-88829419 (-)
LP/J	ENSMUSG00230035485	miRNA gene	Chr16:91216661-91216738 (-)
NOD/ShiLtJ	ENSMUSG00190026697	miRNA gene	Chr16:88654434-88654511 (-)
NZO/HlLtJ	ENSMUSG00225031435	miRNA gene	Chr16:94339213-94339290 (-)
PWK/PhJ	ENSLUMG00010014535	miRNA gene	Chr16:88451443-88451520 (-)
SPRET/EiJ	ENSMSPG00010030251	miRNA gene	Chr16:89597634-89597711 (-)
WSB/EiJ	ENSIUOG00005020933	miRNA gene	Chr16:88562197-88562274 (-)

Homology

• Gene Tree
  Gm54534
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076309 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076309	Ensembl Gene Model | MGI Sequence Detail	78	C57BL/6J
transcript	ENSMUST00020183490	Ensembl | MGI Sequence Detail	78	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;