Gm54533 Gene Detail

Summary

• Symbol
  Gm54533
• Name
  predicted gene, 54533

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845545
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:85926653-85926845 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845545	unclassified non-coding RNA gene	Chr17:85926653-85926845 (+)
129S1/SvImJ	ENSMUSG00200022655	unclassified non-coding RNA gene	Chr17:81328665-81328857 (+)
A/J	ENSMUSG00195029352	unclassified non-coding RNA gene	Chr17:82702394-82702586 (+)
AKR/J	ENSMUSG00220016443	unclassified non-coding RNA gene	Chr17:81652113-81652305 (+)
BALB/cJ	ENSMUSG00180028868	unclassified non-coding RNA gene	Chr17:82375786-82375978 (+)
C3H/HeJ	ENSMUSG00175006848	unclassified non-coding RNA gene	Chr17:81640556-81640748 (+)
C57BL/6NJ	ENSMUSG00215019125	unclassified non-coding RNA gene	Chr17:81369102-81369294 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011797	unclassified non-coding RNA gene	Chr17:82195909-82196101 (+)
CBA/J	ENSMUSG00210022433	unclassified non-coding RNA gene	Chr17:81499350-81499542 (+)
DBA/2J	ENSMUSG00185020457	unclassified non-coding RNA gene	Chr17:84315575-84315767 (+)
FVB/NJ	ENSMUSG00205006347	unclassified non-coding RNA gene	Chr17:82120747-82120939 (+)
JF1/MsJ	ENSUMUG00000016661	unclassified non-coding RNA gene	Chr17:84043591-84043783 (+)
LP/J	ENSMUSG00230010681	unclassified non-coding RNA gene	Chr17:85347186-85347378 (+)
NOD/ShiLtJ	ENSMUSG00190009727	unclassified non-coding RNA gene	Chr17:81396035-81396227 (+)
NZO/HlLtJ	ENSMUSG00225031047	unclassified non-coding RNA gene	Chr17:87605003-87605195 (+)
PWK/PhJ	ENSLUMG00010034397	unclassified non-coding RNA gene	Chr17:81259418-81259610 (+)
SPRET/EiJ	ENSMSPG00010021115	unclassified non-coding RNA gene	Chr17:81839729-81839921 (+)
WSB/EiJ	ENSIUOG00005021818	unclassified non-coding RNA gene	Chr17:82313703-82313895 (+)

Homology

• Gene Tree
  Gm54533
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076084 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076084	Ensembl Gene Model | MGI Sequence Detail	193	C57BL/6J
transcript	ENSMUST00020182080	Ensembl | MGI Sequence Detail	193	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;