Gm54529 Gene Detail

Summary

• Symbol
  Gm54529
• Name
  predicted gene, 54529

• Feature Type
  miRNA gene
• IDs
  MGI:6845537
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:59283893-59283962 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845537	miRNA gene	Chr12:59283893-59283962 (-)
129S1/SvImJ	ENSMUSG00200004358	miRNA gene	Chr12:51179586-51179655 (-)
A/J	ENSMUSG00195001814	miRNA gene	Chr12:53834326-53834395 (-)
AKR/J	ENSMUSG00220015883	miRNA gene	Chr12:51839380-51839449 (-)
BALB/cJ	ENSMUSG00180007647	miRNA gene	Chr12:52851721-52851790 (-)
C3H/HeJ	ENSMUSG00175016768	miRNA gene	Chr12:55893775-55893844 (-)
C57BL/6NJ	ENSMUSG00215010419	miRNA gene	Chr12:52153729-52153798 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012449	miRNA gene	Chr12:52206852-52206921 (-)
CBA/J	ENSMUSG00210014245	miRNA gene	Chr12:52359507-52359576 (-)
DBA/2J	ENSMUSG00185001665	miRNA gene	Chr12:54304747-54304816 (-)
FVB/NJ	ENSMUSG00205005681	miRNA gene	Chr12:52144251-52144320 (-)
JF1/MsJ	ENSUMUG00000009340	miRNA gene	Chr12:58321925-58321994 (-)
LP/J	ENSMUSG00230011679	miRNA gene	Chr12:61301542-61301611 (-)
NOD/ShiLtJ	ENSMUSG00190007024	miRNA gene	Chr12:51330307-51330376 (-)
NZO/HlLtJ	ENSMUSG00225029684	miRNA gene	Chr12:63448884-63448953 (-)
PWK/PhJ	ENSLUMG00010002602	miRNA gene	Chr12:52376762-52376831 (-)
SPRET/EiJ	ENSMSPG00010011370	miRNA gene	Chr12:53917956-53918025 (-)
WSB/EiJ	ENSIUOG00005001036	miRNA gene	Chr12:52167252-52167321 (-)

Homology

• Gene Tree
  Gm54529
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075460 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075460	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020183762	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;