Gm54527 Gene Detail

Summary

• Symbol
  Gm54527
• Name
  predicted gene, 54527

• Feature Type
  rRNA gene
• IDs
  MGI:6845533
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:87053314-87053417 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845533	rRNA gene	Chr15:87053314-87053417 (+)
129S1/SvImJ	ENSMUSG00200036318	rRNA gene	Chr15:84190110-84190213 (+)
A/J	ENSMUSG00195020867	rRNA gene	Chr15:84115132-84115235 (+)
AKR/J	ENSMUSG00220030856	rRNA gene	Chr15:84156530-84156633 (+)
BALB/cJ	ENSMUSG00180015820	rRNA gene	Chr15:83981072-83981175 (+)
C3H/HeJ	ENSMUSG00175028952	rRNA gene	Chr15:84301992-84302095 (+)
C57BL/6NJ	ENSMUSG00215033544	rRNA gene	Chr15:84073622-84073725 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030866	rRNA gene	Chr15:83572004-83572107 (+)
CBA/J	ENSMUSG00210013200	rRNA gene	Chr15:84071604-84071707 (+)
DBA/2J	ENSMUSG00185023251	rRNA gene	Chr15:84096326-84096429 (+)
FVB/NJ	ENSMUSG00205035062	rRNA gene	Chr15:83852297-83852400 (+)
JF1/MsJ	ENSUMUG00000045984	rRNA gene	Chr15:83634082-83634185 (+)
LP/J	ENSMUSG00230045201	rRNA gene	Chr15:87430562-87430665 (+)
NOD/ShiLtJ	ENSMUSG00190031307	rRNA gene	Chr15:84100704-84100807 (+)
NZO/HlLtJ	ENSMUSG00225050908	rRNA gene	Chr15:87760781-87760884 (+)
PWK/PhJ	ENSLUMG00010036157	rRNA gene	Chr15:83814877-83814980 (+)
SPRET/EiJ	ENSMSPG00010015186	rRNA gene	Chr15:85491691-85491792 (+)
WSB/EiJ	ENSIUOG00005011255	rRNA gene	Chr15:84161560-84161663 (+)

Homology

• Gene Tree
  Gm54527
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076844 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076844	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020182255	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;