Gm54526 Gene Detail

Summary

• Symbol
  Gm54526
• Name
  predicted gene, 54526

• Feature Type
  miRNA gene
• IDs
  MGI:6845531
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:36085877-36085960 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845531	miRNA gene	Chr18:36085877-36085960 (+)
129S1/SvImJ	ENSMUSG00200044428	miRNA gene	Chr18:33084889-33084972 (+)
A/J	ENSMUSG00195037383	miRNA gene	Chr18:33251763-33251854 (+)
AKR/J	ENSMUSG00220017369	miRNA gene	Chr18:33227935-33228018 (+)
BALB/cJ	ENSMUSG00180023260	miRNA gene	Chr18:33701387-33701476 (+)
C3H/HeJ	ENSMUSG00175039268	miRNA gene	Chr18:33208852-33208935 (+)
C57BL/6NJ	ENSMUSG00215031655	miRNA gene	Chr18:32954984-32955067 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025645	miRNA gene	Chr18:32865723-32865806 (+)
CBA/J	ENSMUSG00210021857	miRNA gene	Chr18:33243494-33243577 (+)
DBA/2J	ENSMUSG00185021284	miRNA gene	Chr18:33178089-33178172 (+)
FVB/NJ	ENSMUSG00205037466	miRNA gene	Chr18:32889763-32889846 (+)
JF1/MsJ	ENSUMUG00000047202	miRNA gene	Chr18:33335907-33335990 (+)
LP/J	ENSMUSG00230049388	miRNA gene	Chr18:35281658-35281741 (+)
NOD/ShiLtJ	ENSMUSG00190022584	miRNA gene	Chr18:32962655-32962738 (+)
NZO/HlLtJ	ENSMUSG00225046974	miRNA gene	Chr18:35186459-35186542 (+)
PWK/PhJ	ENSLUMG00010013689	miRNA gene	Chr18:33486909-33486992 (+)
SPRET/EiJ	ENSMSPG00010023064	miRNA gene	Chr18:33536821-33536903 (+)
WSB/EiJ	ENSIUOG00005007887	miRNA gene	Chr18:32949437-32949522 (+)

Homology

• Gene Tree
  Gm54526
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075971 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075971	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020182853	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;