Gm54525 Gene Detail

Summary

• Symbol
  Gm54525
• Name
  predicted gene, 54525

• Feature Type
  miRNA gene
• IDs
  MGI:6845529
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:86953194-86953288 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845529	miRNA gene	Chr15:86953194-86953288 (+)
129S1/SvImJ	ENSMUSG00200036328	miRNA gene	Chr15:84095278-84095374 (+)
A/J	ENSMUSG00195020886	miRNA gene	Chr15:84008845-84008939 (+)
AKR/J	ENSMUSG00220030896	miRNA gene	Chr15:84061863-84061963 (+)
BALB/cJ	ENSMUSG00180015830	miRNA gene	Chr15:83886655-83886751 (+)
C3H/HeJ	ENSMUSG00175028974	miRNA gene	Chr15:84201547-84201641 (+)
C57BL/6NJ	ENSMUSG00215033608	miRNA gene	Chr15:83973189-83973283 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030871	miRNA gene	Chr15:83477818-83477912 (+)
CBA/J	ENSMUSG00210013202	miRNA gene	Chr15:83971182-83971276 (+)
DBA/2J	ENSMUSG00185023262	miRNA gene	Chr15:84001612-84001708 (+)
FVB/NJ	ENSMUSG00205035114	miRNA gene	Chr15:83757515-83757611 (+)
JF1/MsJ	ENSUMUG00000046021	miRNA gene	Chr15:83541499-83541597 (+)
LP/J	ENSMUSG00230045247	miRNA gene	Chr15:87335301-87335397 (+)
NOD/ShiLtJ	ENSMUSG00190031326	miRNA gene	Chr15:84000276-84000370 (+)
NZO/HlLtJ	ENSMUSG00225050926	miRNA gene	Chr15:87660352-87660446 (+)
PWK/PhJ	ENSLUMG00010036285	miRNA gene	Chr15:83722058-83722154 (+)
SPRET/EiJ	ENSMSPG00010015199	miRNA gene	Chr15:85390551-85390637 (+)
WSB/EiJ	ENSIUOG00005011261	miRNA gene	Chr15:84067230-84067324 (+)

Homology

• Gene Tree
  Gm54525
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076128 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076128	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020183199	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;