Gm54524 Gene Detail

Summary

• Symbol
  Gm54524
• Name
  predicted gene, 54524

• Feature Type
  miRNA gene
• IDs
  MGI:6845527
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:117642202-117642301 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845527	miRNA gene	Chr3:117642202-117642301 (-)
129S1/SvImJ	ENSMUSG00200027639	miRNA gene	Chr3:114337206-114337305 (-)
A/J	ENSMUSG00195017117	miRNA gene	Chr3:114564586-114564684 (-)
AKR/J	ENSMUSG00220027283	miRNA gene	Chr3:112966506-112966602 (-)
BALB/cJ	ENSMUSG00180031996	miRNA gene	Chr3:114508534-114508632 (-)
C3H/HeJ	ENSMUSG00175028561	miRNA gene	Chr3:114049320-114049418 (-)
C57BL/6NJ	ENSMUSG00215007957	miRNA gene	Chr3:114769187-114769286 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034167	miRNA gene	Chr3:115042042-115042121 (-)
CBA/J	ENSMUSG00210003172	miRNA gene	Chr3:114672333-114672431 (-)
DBA/2J	ENSMUSG00185008038	miRNA gene	Chr3:115251509-115251608 (-)
FVB/NJ	ENSMUSG00205007913	miRNA gene	Chr3:113600367-113600465 (-)
JF1/MsJ	ENSUMUG00000004043	miRNA gene	Chr3:114148452-114148551 (-)
LP/J	ENSMUSG00230012622	miRNA gene	Chr3:117185685-117185782 (-)
NOD/ShiLtJ	ENSMUSG00190037713	miRNA gene	Chr3:115648475-115648574 (-)
NZO/HlLtJ	ENSMUSG00225004100	miRNA gene	Chr3:119681193-119681292 (-)
PWK/PhJ	ENSLUMG00010010056	miRNA gene	Chr3:114019825-114019922 (-)
SPRET/EiJ	ENSMSPG00010032121	miRNA gene	Chr3:114665726-114665729 (-)
WSB/EiJ	ENSIUOG00005007433	miRNA gene	Chr3:114832705-114832802 (-)

Homology

• Gene Tree
  Gm54524
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076621 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076621	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020182896	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;