Gm54521 Gene Detail

Summary

• Symbol
  Gm54521
• Name
  predicted gene, 54521

• Feature Type
  miRNA gene
• IDs
  MGI:6845521
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:69493465-69493534 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  215 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845521	miRNA gene	Chr6:69493465-69493534 (+)
129S1/SvImJ	ENSMUSG00200014130	miRNA gene	Chr6:66399973-66400042 (+)
A/J	ENSMUSG00195044460	miRNA gene	Chr6:66152889-66152958 (+)
AKR/J	ENSMUSG00220045328	miRNA gene	Chr6:65279864-65279940 (+)
BALB/cJ	ENSMUSG00180039060	miRNA gene	Chr6:66508762-66508831 (+)
C3H/HeJ	ENSMUSG00175013655	miRNA gene	Chr6:110941476-110941545 (-)
C57BL/6NJ	ENSMUSG00215043788	miRNA gene	Chr6:66483309-66483378 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210047251	miRNA gene	Chr6:66306132-66306201 (+)
DBA/2J	ENSMUSG00185044904	miRNA gene	Chr6:66871347-66871416 (+)
FVB/NJ	ENSMUSG00205042588	miRNA gene	Chr6:65849781-65849850 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230028999	miRNA gene	Chr6:67991659-67991728 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225020594	miRNA gene	Chr6:69965528-69965597 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010028606	miRNA gene	Chr6:67418065-67418122 (+)
WSB/EiJ	ENSIUOG00005026717	miRNA gene	Chr6:66876314-66876383 (+)

Homology

• Gene Tree
  Gm54521
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002075625 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075625	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020181981	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;