Gm54520 Gene Detail

Summary

• Symbol
  Gm54520
• Name
  predicted gene, 54520

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845519
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:142184265-142184553 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845519	unclassified non-coding RNA gene	Chr6:142184265-142184553 (-)
129S1/SvImJ	ENSMUSG00200033962	unclassified non-coding RNA gene	Chr6:139724588-139724876 (-)
A/J	ENSMUSG00195008436	unclassified non-coding RNA gene	Chr6:138630895-138631183 (-)
AKR/J	ENSMUSG00220033531	unclassified non-coding RNA gene	Chr6:136857832-136858120 (-)
BALB/cJ	ENSMUSG00180017544	unclassified non-coding RNA gene	Chr6:138758479-138758767 (-)
C3H/HeJ	ENSMUSG00175035919	unclassified non-coding RNA gene	Chr6:138657833-138658121 (-)
C57BL/6NJ	ENSMUSG00215029276	unclassified non-coding RNA gene	Chr6:138828990-138829278 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037208	unclassified non-coding RNA gene	Chr6:139501231-139501519 (-)
CBA/J	ENSMUSG00210005593	unclassified non-coding RNA gene	Chr6:138720513-138720801 (-)
DBA/2J	ENSMUSG00185022938	unclassified non-coding RNA gene	Chr6:139371017-139371305 (-)
FVB/NJ	ENSMUSG00205034001	unclassified non-coding RNA gene	Chr6:137751828-137752116 (-)
JF1/MsJ	ENSUMUG00000011880	unclassified non-coding RNA gene	Chr6:138027748-138028036 (-)
LP/J	ENSMUSG00230009916	unclassified non-coding RNA gene	Chr6:140509884-140510172 (-)
NOD/ShiLtJ	ENSMUSG00190006815	unclassified non-coding RNA gene	Chr6:139200928-139201216 (-)
NZO/HlLtJ	ENSMUSG00225013983	unclassified non-coding RNA gene	Chr6:143361114-143361402 (-)
PWK/PhJ	ENSLUMG00010034564	unclassified non-coding RNA gene	Chr6:137104015-137104303 (-)
SPRET/EiJ	ENSMSPG00010016769	unclassified non-coding RNA gene	Chr6:141041425-141041713 (-)
WSB/EiJ	ENSIUOG00005023594	unclassified non-coding RNA gene	Chr6:139443604-139443892 (-)

Homology

• Gene Tree
  Gm54520
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075778 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075778	Ensembl Gene Model | MGI Sequence Detail	289	C57BL/6J
transcript	ENSMUST00020182226	Ensembl | MGI Sequence Detail	289	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;