Gm54519 Gene Detail

Summary

• Symbol
  Gm54519
• Name
  predicted gene, 54519

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845517
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:86033785-86034052 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845517	unclassified non-coding RNA gene	Chr15:86033785-86034052 (+)
129S1/SvImJ	ENSMUSG00200036427	unclassified non-coding RNA gene	Chr15:83162140-83162437 (+)
A/J	ENSMUSG00195020201	unclassified non-coding RNA gene	Chr15:83089221-83089488 (+)
AKR/J	ENSMUSG00220032109	unclassified non-coding RNA gene	Chr15:83142475-83142742 (+)
BALB/cJ	ENSMUSG00180015771	unclassified non-coding RNA gene	Chr15:82965387-82965684 (+)
C3H/HeJ	ENSMUSG00175028036	unclassified non-coding RNA gene	Chr15:83276790-83277057 (+)
C57BL/6NJ	ENSMUSG00215030632	unclassified non-coding RNA gene	Chr15:83053300-83053567 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031173	unclassified non-coding RNA gene	Chr15:82556591-82556888 (+)
CBA/J	ENSMUSG00210013161	unclassified non-coding RNA gene	Chr15:83051680-83051947 (+)
DBA/2J	ENSMUSG00185022842	unclassified non-coding RNA gene	Chr15:83077596-83077863 (+)
FVB/NJ	ENSMUSG00205035852	unclassified non-coding RNA gene	Chr15:82837897-82838164 (+)
JF1/MsJ	ENSUMUG00000042823	unclassified non-coding RNA gene	Chr15:82596335-82596604 (+)
LP/J	ENSMUSG00230045570	unclassified non-coding RNA gene	Chr15:86402271-86402568 (+)
NOD/ShiLtJ	ENSMUSG00190032122	unclassified non-coding RNA gene	Chr15:83075162-83075429 (+)
NZO/HlLtJ	ENSMUSG00225051145	unclassified non-coding RNA gene	Chr15:86740330-86740627 (+)
PWK/PhJ	ENSLUMG00010036769	unclassified non-coding RNA gene	Chr15:82803190-82803456 (+)
SPRET/EiJ	ENSMSPG00010014433	unclassified non-coding RNA gene	Chr15:84459884-84460172 (+)
WSB/EiJ	ENSIUOG00005011646	unclassified non-coding RNA gene	Chr15:83141991-83142258 (+)

Homology

• Gene Tree
  Gm54519
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075739 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075739	Ensembl Gene Model | MGI Sequence Detail	268	C57BL/6J
transcript	ENSMUST00020181826	Ensembl | MGI Sequence Detail	268	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;