Gm54514 Gene Detail

Summary

• Symbol
  Gm54514
• Name
  predicted gene, 54514

• Feature Type
  miRNA gene
• IDs
  MGI:6845508
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:23702312-23702420 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845508	miRNA gene	Chr13:23702312-23702420 (+)
129S1/SvImJ	ENSMUSG00200031192	miRNA gene	Chr13:20833064-20833172 (+)
A/J	ENSMUSG00195040186	miRNA gene	Chr13:19982201-19982309 (+)
AKR/J	ENSMUSG00220033692	miRNA gene	Chr13:19803377-19803485 (+)
BALB/cJ	ENSMUSG00180024930	miRNA gene	Chr13:20300728-20300836 (+)
C3H/HeJ	ENSMUSG00175036341	miRNA gene	Chr13:20306965-20307073 (+)
C57BL/6NJ	ENSMUSG00215013754	miRNA gene	Chr13:20459369-20459477 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010532	miRNA gene	Chr13:20485461-20485569 (+)
CBA/J	ENSMUSG00210027072	miRNA gene	Chr13:20262271-20262379 (+)
DBA/2J	ENSMUSG00185021621	miRNA gene	Chr13:21084248-21084356 (+)
FVB/NJ	ENSMUSG00205035429	miRNA gene	Chr13:20102659-20102767 (+)
JF1/MsJ	ENSUMUG00000015796	miRNA gene	Chr13:20748572-20748680 (+)
LP/J	ENSMUSG00230020518	miRNA gene	Chr13:30413660-30413768 (+)
NOD/ShiLtJ	ENSMUSG00190040709	miRNA gene	Chr13:20084873-20084981 (+)
NZO/HlLtJ	ENSMUSG00225045487	miRNA gene	Chr13:24196676-24196784 (+)
PWK/PhJ	ENSLUMG00010032172	miRNA gene	Chr13:19647228-19647336 (+)
SPRET/EiJ	ENSMSPG00010020092	miRNA gene	Chr13:19413788-19413899 (+)
WSB/EiJ	ENSIUOG00005037948	miRNA gene	Chr13:19599293-19599401 (+)

Homology

• Gene Tree
  Gm54514
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076655 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076655	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020183740	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;