Gm54508 Gene Detail

Summary

• Symbol
  Gm54508
• Name
  predicted gene, 54508

• Feature Type
  miRNA gene
• IDs
  MGI:6845496
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:35690185-35690295 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845496	miRNA gene	Chr18:35690185-35690295 (+)
129S1/SvImJ	ENSMUSG00200045416	miRNA gene	Chr18:32688942-32689052 (+)
A/J	ENSMUSG00195038009	miRNA gene	Chr18:32855660-32855770 (+)
AKR/J	ENSMUSG00220017180	miRNA gene	Chr18:32831980-32832090 (+)
BALB/cJ	ENSMUSG00180023054	miRNA gene	Chr18:33305296-33305406 (+)
C3H/HeJ	ENSMUSG00175042675	miRNA gene	Chr18:32812854-32812964 (+)
C57BL/6NJ	ENSMUSG00215032490	miRNA gene	Chr18:32559049-32559159 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023888	miRNA gene	Chr18:32463430-32463540 (+)
CBA/J	ENSMUSG00210021890	miRNA gene	Chr18:32847460-32847570 (+)
DBA/2J	ENSMUSG00185021048	miRNA gene	Chr18:32782023-32782133 (+)
FVB/NJ	ENSMUSG00205035745	miRNA gene	Chr18:32493840-32493950 (+)
JF1/MsJ	ENSUMUG00000046000	miRNA gene	Chr18:32937869-32937979 (+)
LP/J	ENSMUSG00230049502	miRNA gene	Chr18:34885754-34885864 (+)
NOD/ShiLtJ	ENSMUSG00190023611	miRNA gene	Chr18:32566676-32566786 (+)
NZO/HlLtJ	ENSMUSG00225047088	miRNA gene	Chr18:34790558-34790668 (+)
PWK/PhJ	ENSLUMG00010013448	miRNA gene	Chr18:33083072-33083182 (+)
SPRET/EiJ	ENSMSPG00010022535	miRNA gene	Chr18:33137763-33137873 (+)
WSB/EiJ	ENSIUOG00005008104	miRNA gene	Chr18:32553426-32553536 (+)

Homology

• Gene Tree
  Gm54508
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075136 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075136	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020182368	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;