Gm54507 Gene Detail

Summary

• Symbol
  Gm54507
• Name
  predicted gene, 54507

• Feature Type
  snoRNA gene
• IDs
  MGI:6845494
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:35687545-35687685 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845494	snoRNA gene	Chr18:35687545-35687685 (+)
129S1/SvImJ	ENSMUSG00200045426	snoRNA gene	Chr18:32686302-32686442 (+)
A/J	ENSMUSG00195038017	snoRNA gene	Chr18:32853020-32853160 (+)
AKR/J	ENSMUSG00220017185	snoRNA gene	Chr18:32829340-32829480 (+)
BALB/cJ	ENSMUSG00180023065	snoRNA gene	Chr18:33302656-33302796 (+)
C3H/HeJ	ENSMUSG00175042701	snoRNA gene	Chr18:32810214-32810354 (+)
C57BL/6NJ	ENSMUSG00215032527	snoRNA gene	Chr18:32556409-32556549 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023898	snoRNA gene	Chr18:32460791-32460931 (+)
CBA/J	ENSMUSG00210021893	snoRNA gene	Chr18:32844820-32844960 (+)
DBA/2J	ENSMUSG00185021052	snoRNA gene	Chr18:32779383-32779523 (+)
FVB/NJ	ENSMUSG00205035774	snoRNA gene	Chr18:32491200-32491340 (+)
JF1/MsJ	ENSUMUG00000046015	snoRNA gene	Chr18:32935227-32935367 (+)
LP/J	ENSMUSG00230049495	snoRNA gene	Chr18:34883114-34883254 (+)
NOD/ShiLtJ	ENSMUSG00190023617	snoRNA gene	Chr18:32564036-32564176 (+)
NZO/HlLtJ	ENSMUSG00225047066	snoRNA gene	Chr18:34787918-34788058 (+)
PWK/PhJ	ENSLUMG00010013456	snoRNA gene	Chr18:33080436-33080576 (+)
SPRET/EiJ	ENSMSPG00010022544	snoRNA gene	Chr18:33135116-33135256 (+)
WSB/EiJ	ENSIUOG00005008107	snoRNA gene	Chr18:32550786-32550926 (+)

Homology

• Gene Tree
  Gm54507
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076696 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076696	Ensembl Gene Model | MGI Sequence Detail	141	C57BL/6J
transcript	ENSMUST00020183295	Ensembl | MGI Sequence Detail	141	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;