Gm54506 Gene Detail

Summary

• Symbol
  Gm54506
• Name
  predicted gene, 54506

• Feature Type
  rRNA gene
• IDs
  MGI:6845492
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:48230669-48230787 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845492	rRNA gene	Chr16:48230669-48230787 (-)
129S1/SvImJ	ENSMUSG00200021721	rRNA gene	Chr16:45093804-45093922 (-)
A/J	ENSMUSG00195003529	rRNA gene	Chr16:44717620-44717738 (-)
AKR/J	ENSMUSG00220022873	rRNA gene	Chr16:45062883-45063001 (-)
BALB/cJ	ENSMUSG00180028988	rRNA gene	Chr16:44922363-44922481 (-)
C3H/HeJ	ENSMUSG00175027014	rRNA gene	Chr16:45204569-45204687 (-)
C57BL/6NJ	ENSMUSG00215008080	rRNA gene	Chr16:45026835-45026953 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013057	rRNA gene	Chr16:45355347-45355465 (-)
CBA/J	ENSMUSG00210017026	rRNA gene	Chr16:45234627-45234745 (-)
DBA/2J	ENSMUSG00185011132	rRNA gene	Chr16:45101883-45102001 (-)
FVB/NJ	ENSMUSG00205012721	rRNA gene	Chr16:45011763-45011881 (-)
JF1/MsJ	ENSUMUG00000030779	rRNA gene	Chr16:45341151-45341269 (-)
LP/J	ENSMUSG00230029396	rRNA gene	Chr16:47668248-47668366 (-)
NOD/ShiLtJ	ENSMUSG00190019524	rRNA gene	Chr16:45115530-45115648 (-)
NZO/HlLtJ	ENSMUSG00225026224	rRNA gene	Chr16:50760086-50760204 (-)
PWK/PhJ	ENSLUMG00010028900	rRNA gene	Chr16:45188101-45188219 (-)
SPRET/EiJ	ENSMSPG00010007805	rRNA gene	Chr16:45390465-45390583 (-)
WSB/EiJ	ENSIUOG00005013560	rRNA gene	Chr16:45305689-45305807 (-)

Homology

• Gene Tree
  Gm54506
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075422 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075422	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020182121	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;